Pairwise Alignments

Query, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., sensor protein ZraS from Klebsiella michiganensis M5al

 Score =  102 bits (254), Expect = 2e-26
 Identities = 86/292 (29%), Positives = 134/292 (45%), Gaps = 27/292 (9%)

Query: 66  VIQIAFAPRD-DDGHEISLRNGRKVRLAISASTTGQLILITDLTE---------TRLLQS 115
           VI IAF  R+ D  H   LRN     + I     G ++  T L +          + LQ 
Sbjct: 176 VIFIAFDTRELDADHARGLRN-----MVIMLCAAGVVMAATVLAQFWFRRYQRSRKQLQE 230

Query: 116 RISDLQRLSSLGRMVASLAHQVRTPLSSAMLYAANLAAPNLPPATRERFQSKLV-----D 170
             +  ++L +LG + A +AH++R PLSS    A   A     PA  E  Q  LV     D
Sbjct: 231 ATARKEKLVALGHLAAGVAHEIRNPLSSIKGLAKYFAERT--PADGEAHQLALVMAREAD 288

Query: 171 RLHDLEKQVNDMLLFAKGGDNKVVMPFSIGDLAAEFMPMVETALKNNQIDYGQEVESEET 230
           RL+   + V+++L   +    K      + ++    + +V     +  I      +    
Sbjct: 289 RLN---RVVSELLELVRPAHLKY-QSVDLNEVITHSLQLVSQDAASRAISLTFTAQPALC 344

Query: 231 MLLGNANALASALSNLVMNALQIAGKGSQIDVFFRPV-NGELKISVQDNGPGVPESLQHK 289
            +  + + L   L NL +NA+   G+   I V  R   +G +K+SV D+G G+       
Sbjct: 345 RIQADPDRLKQVLLNLYLNAVHAIGREGVITVAVRECGDGRVKVSVADSGKGMTAEQLQA 404

Query: 290 IMEPFFTTRSQGTGLGLAVVQMVCRAHGGRLELISKEGEGACFTMCIPLERQ 341
           I  P+F+T++ GTGLGLAVVQ +   HGG ++  S  G+GA FT  +P+  Q
Sbjct: 405 IFTPYFSTKADGTGLGLAVVQNIVEQHGGTIDAESAPGKGALFTFYLPVNGQ 456