Pairwise Alignments

Query, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., sensor histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  102 bits (255), Expect = 1e-26
 Identities = 67/238 (28%), Positives = 120/238 (50%), Gaps = 10/238 (4%)

Query: 108 TETRLLQSR--ISDLQRLSSLGRMVASLAHQVRTPLSSAMLYAANLAAP-NLPPATRERF 164
           T+ +L +S   +   ++L+ +G++ A +AH VR PL+S  L   +L     L    RE F
Sbjct: 123 TQAQLEESHETLRQTEKLALVGKLAAGVAHSVRNPLTSVKLRLFSLERSLTLDTQQREDF 182

Query: 165 QSKLVDRLHDLEKQVNDMLLFAKGGDNKVVMPFSIGDLAAEFMPMVETALKNNQIDYGQE 224
           +  + D +  L+  V++ L F++    ++    S  D+    + +++  +++  +     
Sbjct: 183 EV-IADEIRHLDAIVSNFLEFSRRPKLRM-QTVSPSDVVDNTLQLLKHRIESFNVQVQLH 240

Query: 225 VESEETMLLGNANALASALSNLVMNALQIAGKGSQIDV-----FFRPVNGELKISVQDNG 279
                 ++ G+   L  AL NLV+NA +  G   ++D+        P+   + I + D+G
Sbjct: 241 RAERLPVVKGDPEQLKEALVNLVLNACEAMGYDGRLDITEERGIINPLGRAVVIRIADSG 300

Query: 280 PGVPESLQHKIMEPFFTTRSQGTGLGLAVVQMVCRAHGGRLELISKEGEGACFTMCIP 337
           PGVP   +  I +PFF+T+ +GTGLGL + + +   HGG L L S  G GA F   +P
Sbjct: 301 PGVPIDRRDDIFQPFFSTKEEGTGLGLPIAKSIFEEHGGWLHLHSAPGRGATFVAVLP 358