Pairwise Alignments

Query, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 576 a.a., sensory box histidine kinase/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 93.6 bits (231), Expect = 1e-23
 Identities = 109/421 (25%), Positives = 176/421 (41%), Gaps = 86/421 (20%)

Query: 5   AVQEQHSHLDSLED-----QVERY--KQVLDVMPAGVILLDTQGIVREANPEAQRLLDVP 57
           A   ++ H+  LE+       ER   + VLD MP+ V++ DT+G V+  N EA +L  + 
Sbjct: 153 AALREYRHIRELEEARAALSAERAVSRAVLDAMPSAVVVCDTEGRVQYWNNEASKLSGLS 212

Query: 58  LVGEKWYSVIQIAFAPRDDDG-HEISLRNGRKVRLAISASTTGQ---------------- 100
                 +    IA A + +    +  LR    +R A  AS  G+                
Sbjct: 213 PDEALGFPFEDIAPALQLEAALLQAGLRTTTPLRQARHASRHGRHTTYRDVVFYPAATAE 272

Query: 101 ----LILITDLTETRLLQSRISDLQRLSSLGRMVASLAHQVRTPLSSAMLYAANL---AA 153
               ++ I D+T+   ++S +   +++ SLG + A +AH++  PL+  +  A  +    A
Sbjct: 273 GRQLVVRIDDVTDRVRMESLMLQTEKMLSLGGLAAGMAHEINNPLAVILQGADTVQRRLA 332

Query: 154 PNLPPATRE----------------------RFQSKLVDRLHDLEKQVNDMLLFAKGGDN 191
           P L PA R+                      RF + + +        V +ML F +G + 
Sbjct: 333 PGL-PANRDIAREIGLDLDLMHTYLERRKLPRFIAGIAEAGRRAADIVENMLSFGRGDEG 391

Query: 192 KVVMPFSIGDLAAEFMPMVETALK--------NNQIDYGQ-----EVESEETMLLGNANA 238
           +          A +   +VE AL+          + D+ Q     ++      ++ N   
Sbjct: 392 R--------RCAIDINKVVERALELAAHHYDLKKKYDFRQILIVKDLAEGMPSIVCNPIE 443

Query: 239 LASALSNLVMNALQIAGKG------SQIDVFFRPVNGELKISVQDNGPGVPESLQHKIME 292
           +   L NL+ NA Q+  +         I +  R V   L+I V DNGPGVP  L  +I E
Sbjct: 444 MEQVLFNLLQNAAQVLYEAPPQDARPTIHLQTRCVGRLLEIRVTDNGPGVPHELARRIFE 503

Query: 293 PFFTTR--SQGTGLGLAVVQMVCRAHGG---RLELISKEGEGACFTMCIPLERQADSSNS 347
           PFFTT+    GTGLGL+V   +   H G   RLE +     GA F + +PL+   +    
Sbjct: 504 PFFTTKPPGMGTGLGLSVSYFIVSEHHGGTLRLERLRLPEHGARFIVELPLDAMKEPGAE 563

Query: 348 E 348
           E
Sbjct: 564 E 564