Pairwise Alignments

Query, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 679 a.a., sensor protein ZraS (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  126 bits (317), Expect = 1e-33
 Identities = 91/336 (27%), Positives = 165/336 (49%), Gaps = 26/336 (7%)

Query: 25  QVLDVMPAGVILLDTQGIVREANPEAQRLLDVPLV-----GEKWYSVIQIAFAPRDDDGH 79
           +V+  +P G++  D +G + E N     LL V        G  W      A A     G 
Sbjct: 306 KVVSSLPDGLVAFDREGRIDECNAAGADLLGVGASSALGQGASWLPAPLDAMAAYLLGGG 365

Query: 80  -----EISLR--NGRKVRLAISAS--------TTGQLILITDLTETRLLQSRISDLQRLS 124
                E+  R  +G  V L +  +          G ++L+ DL+E R L++ +   ++L+
Sbjct: 366 VLAPTEVECRRADGTSVPLGVRGARIVDDEGRAVGVILLLRDLSEVRHLEAEVRRREKLA 425

Query: 125 SLGRMVASLAHQVRTPLSSAMLYAANLAAPNLPPATRERFQSK-LVDRLHDLEKQVNDML 183
           ++G + A +AH++R PLSS   YA        P  + +R  ++ +V  +  L + ++D++
Sbjct: 426 AVGNLAAGVAHEIRNPLSSIKGYATYFGT-RFPEGSDDREAARVMVQEVDRLNRVISDLI 484

Query: 184 LFAKGGDNKVVMPFSIGDLAAEFMPMVETALKNNQIDYGQEVESEETMLLGNANALASAL 243
             ++  D +   P  + D+    + +V    +  ++    E   +    L + +  A AL
Sbjct: 485 GLSRPSDIRP-RPTRVADIVDHALRLVRPDAEARKVAVRFEAAPDVPEALVDPDRFAQAL 543

Query: 244 SNLVMNALQIAGKGSQIDVF-FRPVNGELKISVQDNGPGV-PESLQHKIMEPFFTTRSQG 301
            N+ +N ++  G G ++ V  +R  +G + +SV+D GPG+ PE+L  ++ +P+FTT+ QG
Sbjct: 544 LNVCLNGMEAMGDGGELMVTAYRHGDGRVAVSVRDTGPGISPENLS-RVFDPYFTTKGQG 602

Query: 302 TGLGLAVVQMVCRAHGGRLELISKEGEGACFTMCIP 337
           TGLGLA+V  +  AHGG +   S+ G G   T  +P
Sbjct: 603 TGLGLAIVHKIIEAHGGEVGFRSEPGHGTECTFILP 638