Pairwise Alignments

Query, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 577 a.a., sensor histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  100 bits (249), Expect = 9e-26
 Identities = 90/343 (26%), Positives = 155/343 (45%), Gaps = 22/343 (6%)

Query: 23  YKQVLDVMPAGVILLDTQ-GIVREANPEAQRL-LDVPLVGEKWYSVIQIAFAPRDDDGHE 80
           Y  VLDVMP  V  L  +  I+   +PE +++ L    +    ++++  A  P+ +    
Sbjct: 234 YGNVLDVMPMPVPHLSYEPSIIDTEDPEGRQIFLSSAFLQNADFAIV--AVKPKTEILRP 291

Query: 81  -ISLRNGRKVRLAIS-ASTTGQLILITDLTETRLLQS---------RISDLQRLSSLGRM 129
             SLR+   + +A S A         TD+   R+  S         +I   Q+LSS+GR+
Sbjct: 292 WTSLRSDLLIFVAFSVALIISAAFGFTDMLVRRMRDSDERRIAAFVQIEHTQKLSSIGRL 351

Query: 130 VASLAHQVRTPLS---SAMLYAANLAAPNLPPATRERFQS--KLVDRLHDLEKQVNDMLL 184
            A +AH++  PL+        AA+L A +     +ERF +  + + R  D  + +   LL
Sbjct: 352 AAGVAHEINNPLAIINEKAGLAADLIALSQDFPQKERFSAIVEAISRSVDRCRSITHRLL 411

Query: 185 FAKGGDNKVVMPFSIGDLAAEFMPMVETALKNNQIDYGQEVESEETMLLGNANALASALS 244
                 +       +  +  E M  +E    +  I  G  +++    +  +   L     
Sbjct: 412 GFSRRMDATYEQLDVNGILKETMSFLEQEAVHRSITIGTSLDAGLPRITSDRGQLQQVFL 471

Query: 245 NLVMNALQIAGKGSQIDVF-FRPVNGELKISVQDNGPGVPESLQHKIMEPFFTT-RSQGT 302
           N++ NA      G  + +  F    G + +S+QDNG G+ E +Q  I EPFFTT ++ GT
Sbjct: 472 NIINNAFAAVQDGGSVTLTTFAADGGMVGVSIQDNGKGMSEEVQRHIFEPFFTTKKTAGT 531

Query: 303 GLGLAVVQMVCRAHGGRLELISKEGEGACFTMCIPLERQADSS 345
           GLG+ +   + +  GG + + S+EG G   T+ +P +  A  S
Sbjct: 532 GLGMFITYGIIKRLGGEIGINSREGVGTTVTVYLPQDAPAPQS 574