Pairwise Alignments

Query, 351 a.a., PAS domain-containing sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 579 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  112 bits (279), Expect = 3e-29
 Identities = 91/347 (26%), Positives = 162/347 (46%), Gaps = 34/347 (9%)

Query: 20  VERYK-QVLDVMPAGVILLDTQGIVREANPEAQRLLDVP---LVGEKWYSVIQIAFAP-- 73
           +ER++ ++LD +P G+I +     +  ANP A  +L +    L G     + +   AP  
Sbjct: 222 LERFQARLLDNLPDGLITVSRSDTISAANPAAHGILGIAPGRLAGMSIAELPEGIVAPVA 281

Query: 74  ---RDDDGHEISLRNGRKVRLAISASTT--------------GQLILITDLTETRLLQSR 116
                    E     GR    ++  +                 +L++I D T+ R L+  
Sbjct: 282 RVAEGGSSAEPEAAAGRWFTRSVGGAHLEVLTLPIRQGDDDHDRLVIIRDRTQIRELEKN 341

Query: 117 ISDLQRLSSLGRMVASLAHQVRTPLSSAMLYAANLAAPNLPPATRERFQSKLVDRLHDLE 176
           +S+ ++L++LG + A +AH++R PLS+   +A   A   +     E +   +V     L 
Sbjct: 342 LSEAEKLAALGTLAAGVAHEIRNPLSALRGFAQYFAKKLVGRQPDETYAQTMVREADRLN 401

Query: 177 KQVNDMLLFAK--GGDNKVVMPFSIGDLAAEFMPMVETALKNNQIDYGQEVESEETMLLG 234
           + + D+L  ++    D + V   S+G L A+   +V   L+   I    +V     ++  
Sbjct: 402 RVITDLLYLSRPRAMDARAV---SLGQLVADIGNLVRFDLEKRNI--ALKVSLGPDIVWA 456

Query: 235 NANALASALSNLVMNALQ----IAGKGSQIDVFFRPVNGELKISVQDNGPGVPESLQHKI 290
           + +AL  A+ NLV+N++     +A    +I V     +G   + V D+GPG+    + + 
Sbjct: 457 DEDALKQAVLNLVLNSIDALEGLATGEREIHVSSAQGDGGTWVFVGDSGPGMSALQREQA 516

Query: 291 MEPFFTTRSQGTGLGLAVVQMVCRAHGGRLELISKEGEGACFTMCIP 337
            EPFFTT+ +GTGLGLA+V    R H GR ++ S+ G G   ++  P
Sbjct: 517 FEPFFTTKKKGTGLGLALVHKTMREHDGRAQIDSEMGRGTTVSLFFP 563