Pairwise Alignments

Query, 479 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 463 a.a., C4-dicarboxylate transport transcriptional regulatory protein from Pseudomonas fluorescens FW300-N2E2

 Score =  284 bits (726), Expect = 5e-81
 Identities = 185/486 (38%), Positives = 256/486 (52%), Gaps = 70/486 (14%)

Query: 7   KVLIVEDDEGLREALIDTLALAGYEWLEADCAEDALLKLKSHSVDIVVSDVQMAGMGGLA 66
           +V++++DD  LR+AL  TL LAG + L    A+    +L      +VVSD++M GM GL 
Sbjct: 8   EVVLIDDDPHLRQALSQTLDLAGLKILPLAEAKGVAGQLPRDWPGVVVSDIRMPGMDGLE 67

Query: 67  LLRSIKQHWPNLPVLLMTAYANIQDAVSAMKDGAIDYMAKPFAPEVLLNMVSRYAPVKSD 126
           LL  +      LPVLL+T + ++  AV AM+ GA D++ KPFA + LL+ V R   ++  
Sbjct: 68  LLNELHAQDAELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDHLLDSVRRALALRR- 126

Query: 127 DNGDAVVADTKSLKLLALADK-----------------------VAKTDANVMILGPSGS 163
                +V D +SL+L AL+D+                       +A T A+V+ILG +G+
Sbjct: 127 -----LVLDNRSLRL-ALSDRHELSARLVGQSTPMLRLREQIGALAATRADVLILGETGA 180

Query: 164 GKEVMSRYIHNASPRKEGPFIAINCAAIPDNMLEATLFGYEKGAFTGAVQACPGKFEQAQ 223
           GKEV++R +H+ S R+ GPF+AIN  A+ ++++E+ LFG+E GAFTGA +   GKFE A 
Sbjct: 181 GKEVVARALHDLSSRRNGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKFEFAN 240

Query: 224 GGTILLDEISEMDLNLQAKLLRVLQEREVERLGSRKSIKLDVRVLATSNRDLKQYVQAGH 283
           GGT+ LDEI  M L++Q KLLR+LQER VERLG    I LD+RV+A +  DL+Q    G 
Sbjct: 241 GGTLFLDEIESMSLDVQVKLLRLLQERVVERLGGNHQIPLDIRVIAATKEDLRQAADQGR 300

Query: 284 FREDLYYRLNVFPLTWPALCERKDDIEPLANHLIERHCKKLGLPVPSIAPNAITKLLNYP 343
           FR DLYYRLNV PL  P L ER +D   L  H  +    + GLP   + P     LL + 
Sbjct: 301 FRADLYYRLNVAPLRIPPLRERGEDTLMLFQHFADEASARHGLPPHELQPAQRALLLRHS 360

Query: 344 WPGNVRELDNVVQRALILSENGHIQSEHILLEGVDWHDASSLQQAVAGESMAAPQIKPVA 403
           WPGNVREL N  +R  +                              G  +A     P  
Sbjct: 361 WPGNVRELQNAAERFAL------------------------------GLELALDNSAPDG 390

Query: 404 EPEVFKPLVQGGGQNSSSQSSGLGGELRDQEFAIILDTLAECQGRRKEMAEKLGISPRTL 463
            P     LV G          GL  ++ + E  +I   LA      + +AE LGI  +TL
Sbjct: 391 NPGAPVELVSG----------GLSEQVENFEKTLIAAELARPHSSVRSLAEALGIPRKTL 440

Query: 464 RYKLAK 469
             KL K
Sbjct: 441 HDKLRK 446