Pairwise Alignments

Query, 479 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 494 a.a., Two-component response regulator CbrB from Pseudomonas syringae pv. syringae B728a

 Score =  285 bits (729), Expect = 2e-81
 Identities = 170/401 (42%), Positives = 244/401 (60%), Gaps = 34/401 (8%)

Query: 8   VLIVEDDEGLREALIDTLALAGYEWLEADCAEDALLKLKSHSVDIVVSDVQMAGMGGLAL 67
           +LIVED+  +R AL   L    YE  EA   ++A  +    S D++VSD+++ G  G  L
Sbjct: 21  ILIVEDETIIRSALRRLLERNQYEVSEAGSVQEAQERFSIPSFDLIVSDLRLPGAPGTEL 80

Query: 68  LRSIKQHWPNLPVLLMTAYANIQDAVSAMKDGAIDYMAKPFAPEVLLNMVSRY------- 120
           ++  +      PVL+MT+YA+++ AV +MK GA+DY+AKPF  + +L  VSR        
Sbjct: 81  IKLGE----GKPVLIMTSYASLRSAVDSMKMGAVDYIAKPFDHDEMLQAVSRILRDRQTV 136

Query: 121 ----------APVKSDDNGDA---------VVADTKSLKLLALADKVAKTDANVMILGPS 161
                     A   S + G A         + +    L L +   KVA TD+NV+I G S
Sbjct: 137 KHLQDERGATARTSSAEKGPAQNHNGEIGIIGSCPPMLDLYSKIRKVAPTDSNVLIQGES 196

Query: 162 GSGKEVMSRYIHNASPRKEGPFIAINCAAIPDNMLEATLFGYEKGAFTGAVQACPGKFEQ 221
           G+GKE+++R +HN S R + P I++NCAAIP++++E+ LFG+EKGAFTGA     G  E 
Sbjct: 197 GTGKELVARALHNLSRRAKAPMISVNCAAIPESLIESELFGHEKGAFTGASAGRAGLVEA 256

Query: 222 AQGGTILLDEISEMDLNLQAKLLRVLQEREVERLGSRKSIKLDVRVLATSNRDLKQYVQA 281
           A GGT+ LDEI E+ L  QA+LLRVLQE E+ R+GS +S K+DVR++A ++RDLK   + 
Sbjct: 257 ADGGTLFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKTLAKN 316

Query: 282 GHFREDLYYRLNVFPLTWPALCERKDDIEPLANHLIERHCKKLGLPVPSIAPNAITKLLN 341
           G FREDL+YRL+V  L  PAL ER +DI  +A+  + R   K+G      A +A   + +
Sbjct: 317 GEFREDLFYRLHVIALKLPALRERGNDILEIAHAFLVRQSGKVGRDDLKFAHDAEQAIRH 376

Query: 342 YPWPGNVRELDNVVQRALILSENGHIQSE----HILLEGVD 378
           Y WPGNVREL+N V+R++IL EN  I ++     I L+G+D
Sbjct: 377 YSWPGNVRELENAVERSVILCENPEITADLLGIDIELDGLD 417