Pairwise Alignments

Query, 479 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

 Score =  275 bits (703), Expect = 2e-78
 Identities = 155/375 (41%), Positives = 220/375 (58%), Gaps = 16/375 (4%)

Query: 7   KVLIVEDDEGLREALIDTLALAGYEWLEADCAEDALLKLKSHSVDIVVSDVQMAGMGGLA 66
           +VL+VEDD  +R      L L        D AE A  +L      IVVSD+++ GM G+A
Sbjct: 8   QVLLVEDDPDVRLGCEQALQLEDIPVSSVDSAEKARRRLTRDFPGIVVSDIRLPGMDGMA 67

Query: 67  LLRSIKQHWPNLPVLLMTAYANIQDAVSAMKDGAIDYMAKPFAPEVLLNMVSRY------ 120
           LL+ ++   P LPV+L+T + ++  AV AMK GA D++ KPF+P+ L+ +V R       
Sbjct: 68  LLKELQAIDPELPVVLITGHGDVSLAVQAMKGGAHDFIEKPFSPDYLVEVVRRALDKRRL 127

Query: 121 --------APVKSDDNGDA--VVADTKSLKLLALADKVAKTDANVMILGPSGSGKEVMSR 170
                   A ++S D  +A  +      +K+  L   +  + A+++I G +G+GKE+ +R
Sbjct: 128 TLEVRQLRARLESRDTLEARLIGRSPAMVKVRQLVADLGNSAADILIFGETGTGKELAAR 187

Query: 171 YIHNASPRKEGPFIAINCAAIPDNMLEATLFGYEKGAFTGAVQACPGKFEQAQGGTILLD 230
            +H A PR+ G F+AINC  +P+ + E+ +FG+E GA+TGA +   GK E A GGT+ LD
Sbjct: 188 CLHEAGPRRNGNFVAINCGGLPETLFESEIFGHEAGAYTGAAKKRIGKIEHASGGTLFLD 247

Query: 231 EISEMDLNLQAKLLRVLQEREVERLGSRKSIKLDVRVLATSNRDLKQYVQAGHFREDLYY 290
           EI  M + +Q KLLRVLQER +ERLGS   I +D RV+A +  DLK+    G FR DLYY
Sbjct: 248 EIESMPMAMQIKLLRVLQERSLERLGSNTPIPVDCRVIAATKADLKELSDQGRFRADLYY 307

Query: 291 RLNVFPLTWPALCERKDDIEPLANHLIERHCKKLGLPVPSIAPNAITKLLNYPWPGNVRE 350
           RLNV  L  P L ER++DI  L  H + +   +   PVP+  P  +  LL Y WPGNVRE
Sbjct: 308 RLNVATLPLPPLRERREDIPLLFEHFLLQAAARHERPVPAADPARMGPLLAYDWPGNVRE 367

Query: 351 LDNVVQRALILSENG 365
           L NV  R ++  E G
Sbjct: 368 LRNVADRCVLGIEAG 382