Pairwise Alignments

Query, 479 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

 Score =  318 bits (814), Expect = 3e-91
 Identities = 169/367 (46%), Positives = 241/367 (65%), Gaps = 10/367 (2%)

Query: 6   SKVLIVEDDEGLREALIDTLALAGYEWLEADCAEDALLKLKSHSVDIVVSDVQMAGMGGL 65
           +++L+V+DD  + + L   LA AG+    AD  E AL+  ++    +V++D++M GM GL
Sbjct: 2   AELLLVDDDADILKLLALRLATAGHRVRTADSGEQALVMFQAQRPQLVITDLKMGGMDGL 61

Query: 66  ALLRSIKQHWPNLPVLLMTAYANIQDAVSAMKDGAIDYMAKPFAPEVLLNMVS---RYAP 122
           AL   I++  P LPV+++TA+  I +AV A + G   ++ KPF  + LL  V    R A 
Sbjct: 62  ALFDEIQRRAPTLPVIVLTAHGTIPEAVDATRRGVFGFLTKPFDGKALLEQVEQALRLAS 121

Query: 123 VKSDDNG-------DAVVADTKSLKLLALADKVAKTDANVMILGPSGSGKEVMSRYIHNA 175
                 G       D V       +LL  A  VA +DA+V I G SG+GKE+++R IH A
Sbjct: 122 PAGQGGGENEPWRADLVGGSPAMQELLERARLVAASDASVFIAGASGTGKELLARAIHLA 181

Query: 176 SPRKEGPFIAINCAAIPDNMLEATLFGYEKGAFTGAVQACPGKFEQAQGGTILLDEISEM 235
           SPR + PF+AINCAAIP+N+LE+ LFG+ KGAFTGA     G F +A GGT+ LDEI +M
Sbjct: 182 SPRADKPFVAINCAAIPENLLESELFGHRKGAFTGATYNHKGLFLEADGGTVFLDEIGDM 241

Query: 236 DLNLQAKLLRVLQEREVERLGSRKSIKLDVRVLATSNRDLKQYVQAGHFREDLYYRLNVF 295
            L+LQAKLLRVLQER+V  +G+ +++ +DVRV++ ++RDL + +++G FREDLYYRLNV 
Sbjct: 242 PLSLQAKLLRVLQERQVRPVGATQAVPVDVRVVSATHRDLDELLKSGQFREDLYYRLNVV 301

Query: 296 PLTWPALCERKDDIEPLANHLIERHCKKLGLPVPSIAPNAITKLLNYPWPGNVRELDNVV 355
            L  P L ER++DI  LANH ++R   + G PV + AP+A+  L+  PWPGNVR+L NVV
Sbjct: 302 SLALPLLAERREDIPLLANHFLQRTASRYGKPVTAFAPDAMEALVTAPWPGNVRQLQNVV 361

Query: 356 QRALILS 362
           ++A+ LS
Sbjct: 362 EQAVALS 368