Pairwise Alignments

Query, 479 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., transcriptional regulatory protein ZraR from Klebsiella michiganensis M5al

 Score =  288 bits (738), Expect = 2e-82
 Identities = 176/480 (36%), Positives = 271/480 (56%), Gaps = 48/480 (10%)

Query: 1   MKMAQSKVLIVEDDEGLREALIDTLALAGYEWLEADCAEDALLKLKSHSVDIVVSDVQMA 60
           M   Q  +L+V+DD      L   L   GY    A+    AL K++    D+V+ D++MA
Sbjct: 1   MSGEQVDILVVDDDISHCTILQALLRGWGYRVALANNGLQALEKVREKVFDLVLCDIRMA 60

Query: 61  GMGGLALLRSIKQHWPNLPVLLMTAYANIQDAVSAMKDGAIDYMAKPF--------APEV 112
            M G+  L+ IK   P++PVL+MTAY+++  AV A+K GA+DY+ KP           E 
Sbjct: 61  EMDGIETLKEIKTFNPSIPVLIMTAYSSVDTAVEALKSGALDYLIKPLDFDKLQLTLSEA 120

Query: 113 LLNMVSRYAPVKSDDNGD-AVVADTKSLK-LLALADKVAKTDANVMILGPSGSGKEVMSR 170
           L +     +PV         +V D+ +++ LL     VA +DA V+I G SG+GKE+++R
Sbjct: 121 LAHTRLSESPVTETPAAQFGMVGDSPAMRALLNNITLVAPSDATVLIHGESGTGKELVAR 180

Query: 171 YIHNASPRKEGPFIAINCAAIPDNMLEATLFGYEKGAFTGAVQACPGKFEQAQGGTILLD 230
            +H +S R   P + +NCAA+ +++LE+ LFG+EKGAFTGA +   G+F +A GGT+ LD
Sbjct: 181 ALHASSARSRRPLVILNCAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLD 240

Query: 231 EISEMDLNLQAKLLRVLQEREVERLGSRKSIKLDVRVLATSNRDLKQYVQAGHFREDLYY 290
           EI ++   +Q +LLR +QEREV+R+GS +++ +DVR++A ++RDL + V AG FR+DLYY
Sbjct: 241 EIGDISPLMQVRLLRAIQEREVQRVGSNQTLSVDVRLIAATHRDLAEEVSAGRFRQDLYY 300

Query: 291 RLNVFPLTWPALCERKDDIEPLANHLIERHCKKLGLPVPSIAPNAITKLLNYPWPGNVRE 350
           RLNV  +  P L  R++DI PLA + ++R+ ++    V    P A+  L++Y WPGN+RE
Sbjct: 301 RLNVVTIDMPPLRHRREDIPPLARYFLQRYAERNRKAVQGFTPQAMDLLIHYAWPGNIRE 360

Query: 351 LDNVVQRALILSENGHIQSEHILLEGVDWHDASSLQQAVAGESMA-APQIKPVAEPEVFK 409
           L+N V+RA++L    +I    + L             A+ G  +A AP        +  +
Sbjct: 361 LENAVERAVVLLTGEYISERELPL-------------AITGTPVADAPH-----GDDSIQ 402

Query: 410 PLVQGGGQNSSSQSSGLGGELRDQEFAIILDTLAECQGRRKEMAEKLGISPRTLRYKLAK 469
           PLV+                    E   IL  L    G + E A +LGI+ +TL  KL++
Sbjct: 403 PLVE-------------------VEKEAILAALERTGGNKTEAARRLGITRKTLLAKLSR 443