Pairwise Alignments

Query, 580 a.a., flagellar basal body M-ring protein FliF from Vibrio cholerae E7946 ATCC 55056

Subject, 567 a.a., flagellar M-ring protein FliF from Rhodanobacter denitrificans FW104-10B01

 Score =  243 bits (620), Expect = 2e-68
 Identities = 173/547 (31%), Positives = 272/547 (49%), Gaps = 36/547 (6%)

Query: 54  RQVVLVLSISICVALIVMLFFWVREPDMRPLGA-YETEELIPVLDYLDQQKQQYKL--DG 110
           RQ+VL+++++  VAL V +  W R P+   L A  E ++   +   L      Y+L  DG
Sbjct: 29  RQLVLLVAVAAAVALGVAVVLWSRGPNYGLLYAGLEQKDASAITQELQAGNTPYQLSSDG 88

Query: 111 NTILVPVSDYNSLKLSMVRAGLNQNRQAGDEILMQDMGFGVSQRLEQERLKLSRERQLAK 170
           ++I+ P +D  +L+L +   GL Q   +   +   D  FG+S   E+ R +   E  L  
Sbjct: 89  SSIMAPAADLAALRLKLAAKGLPQGSASSSALPAADSPFGMSDLAERTRYQQLLEADLGA 148

Query: 171 AIEEMRQVNKARVLLALPKQSVFVRHNQEASASVFLTVRTGANLKQEEIDAVVDMVASAV 230
            I  ++ V  ARV LALPK S F+R ++EASASV +T+  G  L   ++ A+V +VA++V
Sbjct: 149 TIGGLQSVRAARVHLALPKPSAFIRDSREASASVLVTLYPGRQLDAGQVAAIVHLVAASV 208

Query: 231 PGMKPSRVTVTDQHGRLLSSGSQDPVSAARRKEQELEKQQEEALRGKIDSVLIPILGLGN 290
           P ++  +V+V DQ G+LL++  + P  A       +  + E     +I+ +L+P++G G 
Sbjct: 209 PNLEARQVSVIDQQGQLLTTDPESP-GAVGDNRLRIATRIENTYAQRIEELLMPLVGPGR 267

Query: 291 YTAQVDIELDFSAVEQTRKVFDPNTPATRSEYTLEDYNNGNVV-AGVPGALSNQPPADAS 349
             AQV  +LDFS  E+  + F  + PA RSE T  +    +    GVPGALSNQPP   +
Sbjct: 268 VHAQVHADLDFSRTEKATETFGHDHPALRSEQTSSEQRGADAAGGGVPGALSNQPPVTVA 327

Query: 350 IP--------QDVAQMKDGSVMGQGSVHKEATRNYELDTTISHERKQSGVINRQTVAVAV 401
            P        +  A     +    G     ATRNYELD TISH    +G + R TVAV V
Sbjct: 328 QPTAAKPDAGKAAAATATAAATNPGESSSSATRNYELDRTISHVSDPAGRLARLTVAVVV 387

Query: 402 KSRSSV--NPDTGEVTYT------PLSEADLNSIRQVLIGTVGYSENRGDLLNVLSMPFA 453
             + +V  NPD G    T      P S  +L  + ++    VG+   RGD ++V++  F 
Sbjct: 388 DDKLAVPANPDAGADDATAAPKSVPFSAQELQHLTELTKNAVGFDAARGDSVSVVNQAFQ 447

Query: 454 E-PEMEQIVDVPIWEHPNFNDWVRWFASALVIIIVILVLVRPAMKKLI--NPAADNDDQM 510
                E + + P+W  P   D ++  A  L+ ++V   L+RP +K L+   PAA      
Sbjct: 448 RGAAPEALPETPLWGRPGVLDLLKQGAGVLIALLVAFGLLRPLLKGLLRGEPAA------ 501

Query: 511 YGPDGMPIGADGETSLIGSDIDGGELFEFGSGIDLPNLHKDEDVLKAVRALVANEPELAA 570
                +P      +  +  ++   E    G    +P L  ++ V +A R +V    +  A
Sbjct: 502 ---RALPSPMPQISVRVDDELAANEPARLGGA--MPTLSYEQRVGQA-RRMVGENSKQVA 555

Query: 571 QVVKNWM 577
           QVV+NW+
Sbjct: 556 QVVRNWV 562