Pairwise Alignments

Query, 580 a.a., flagellar basal body M-ring protein FliF from Vibrio cholerae E7946 ATCC 55056

Subject, 594 a.a., flagellar M-ring protein FliF from Pseudomonas fluorescens FW300-N2C3

 Score =  285 bits (729), Expect = 4e-81
 Identities = 184/568 (32%), Positives = 303/568 (53%), Gaps = 45/568 (7%)

Query: 47  VGDLDLLRQVVLVLSISICVALIVMLFFWVREPDMRPL-GAYETEELIPVLDYLDQQKQQ 105
           + ++ +LRQV L++ ++  VA+   +  W ++PD RPL G+    +   V++ L      
Sbjct: 31  LSEMTMLRQVGLLVGLAASVAIGFAVVLWSQQPDYRPLYGSLAGMDAKQVMETLASADIP 90

Query: 106 YKLDGNT--ILVPVSDYNSLKLSMVRAGLNQ-NRQAGDEILMQDMGFGVSQRLEQERLKL 162
           Y ++ N+  +LV   D    +L +  AG+   +   G EIL +D G G SQ +E  R + 
Sbjct: 91  YTVEPNSGALLVKADDVARARLKLAAAGVTPTDGNIGFEILDKDQGLGTSQFMEATRYRR 150

Query: 163 SRERQLAKAIEEMRQVNKARVLLALPKQSVFVRHNQEASASVFLTVRTGANLKQEEIDAV 222
             E +LA+ I  +  V  ARV LA+PK SVFVR  ++ SASV + + +G +L+  ++ A+
Sbjct: 151 GLEGELARTISSLNNVKGARVHLAIPKSSVFVRDERKPSASVLVELYSGRSLEPGQVVAI 210

Query: 223 VDMVASAVPGMKPSRVTVTDQHGRLLSSGSQDPVSAARRKEQELEKQQEEALRGKIDSVL 282
           V++VA++VP +  S++TV DQ G LLS  +++       K+ +  ++ E  L  ++ ++L
Sbjct: 211 VNLVATSVPELSKSQITVVDQKGNLLSDQAENSELTMAGKQFDYSRRMEGMLTQRVHNIL 270

Query: 283 IPILGLGNYTAQVDIELDFSAVEQTRKVFDPNTPATRSEYTLEDYNNG-NVVAGVPGALS 341
            PILG   Y A+V  ++DFSAVE T + F+P+ PA RSE ++ +     N   GVPGALS
Sbjct: 271 QPILGNDRYKAEVSADVDFSAVESTSEQFNPDQPALRSEQSVNEQRTASNGPQGVPGALS 330

Query: 342 NQPPADASIPQDVAQMKDGSVMGQ---------------------------GSVHKEATR 374
           NQPP+ AS PQ        + M Q                               +++T+
Sbjct: 331 NQPPSPASAPQTTGGATAAAGMVQPGQPLIDANGQQIMDPATGQPMLAPYPADKRQQSTK 390

Query: 375 NYELDTTISHERKQSGVINRQTVAVAVKSRSSVNPDTGEVTYTPLSEADLNSIRQVLIGT 434
           N+ELD +ISH ++Q G +NR +VAV V  +  VNP  GE +  P S  +L    +++   
Sbjct: 391 NFELDRSISHTKQQQGRLNRLSVAVVVDDQVKVNPANGETSRAPWSADELARFTRLVQDA 450

Query: 435 VGYSENRGDLLNVLSMPFAEPEMEQIVDVPIWEHPNFNDWVRWFASALVIIIVILVLVRP 494
           VG+  +RGD ++V+++PF+    E + D+P +  P F D V+     L I+I++  ++RP
Sbjct: 451 VGFDASRGDSVSVINVPFSLERGEVVADIPFYSQPWFWDVVKQVLGVLFILILVFGVLRP 510

Query: 495 AMKKLINPAADNDDQMYGPDGMPIGA----DGETSLIGSDIDGGELFEFGSGIDLPNLHK 550
            +  + N     + Q+ G   + +G     DGE +     + G +       I LP+  +
Sbjct: 511 VLNNITN--GGRNKQLAGLGDVELGGMGGLDGELANDRVSLGGPQ------SILLPSPSE 562

Query: 551 DEDV-LKAVRALVANEPELAAQVVKNWM 577
             D  L A+++LVA +P   AQVVK W+
Sbjct: 563 GYDAQLNAIKSLVAEDPGRVAQVVKEWI 590