Pairwise Alignments

Query, 580 a.a., flagellar basal body M-ring protein FliF from Vibrio cholerae E7946 ATCC 55056

Subject, 595 a.a., Flagellar M-ring protein FliF from Pseudomonas fluorescens FW300-N1B4

 Score =  284 bits (726), Expect = 8e-81
 Identities = 182/567 (32%), Positives = 300/567 (52%), Gaps = 42/567 (7%)

Query: 47  VGDLDLLRQVVLVLSISICVALIVMLFFWVREPDMRPL-GAYETEELIPVLDYLDQQKQQ 105
           + ++ +LRQV L++ ++  VA+   +  W ++PD RPL G+    +   V++ L      
Sbjct: 31  LSEMTMLRQVGLLVGLAASVAIGFAVVLWSQQPDYRPLYGSLAGMDAKQVMETLAAADIP 90

Query: 106 YKLDGNT--ILVPVSDYNSLKLSMVRAGLN-QNRQAGDEILMQDMGFGVSQRLEQERLKL 162
           Y ++ N+  +LV   D +  +L +  AG+   +   G EIL ++ G G SQ +E  R + 
Sbjct: 91  YTVEPNSGALLVKADDLSRARLKLAGAGVTPSDGNIGFEILDKEQGLGTSQFMEATRYRR 150

Query: 163 SRERQLAKAIEEMRQVNKARVLLALPKQSVFVRHNQEASASVFLTVRTGANLKQEEIDAV 222
             E +LA+ I  +  V  ARV LA+PK SVFVR  ++ SASV + + +G +L+  ++ A+
Sbjct: 151 GLEGELARTISSLNNVKGARVHLAIPKSSVFVRDERKPSASVLVELYSGRSLEPGQVVAI 210

Query: 223 VDMVASAVPGMKPSRVTVTDQHGRLLSSGSQDPVSAARRKEQELEKQQEEALRGKIDSVL 282
           +++VA++VP +  S++TV DQ G LLS  +++       K+ +  ++ E  L  ++ ++L
Sbjct: 211 INLVATSVPELSKSQITVVDQKGNLLSDQAENSELTMAGKQFDYSRRMESMLTQRVHNIL 270

Query: 283 IPILGLGNYTAQVDIELDFSAVEQTRKVFDPNTPATRSEYTLEDYNNG-NVVAGVPGALS 341
            P+LG   Y A+V  ++DFSAVE T + F+P+ PA RSE ++ +     N   GVPGALS
Sbjct: 271 QPVLGNDRYKAEVSADVDFSAVESTSEQFNPDQPALRSEQSVNEQRTASNGPQGVPGALS 330

Query: 342 NQPPADASIPQDVAQMKDGSVMGQ---------------------------GSVHKEATR 374
           NQPP+ AS PQ        + M Q                               +++T+
Sbjct: 331 NQPPSPASAPQTTGGATASAGMVQPGQPLLDANGQQIMDPATGQPMLAPYPADKRQQSTK 390

Query: 375 NYELDTTISHERKQSGVINRQTVAVAVKSRSSVNPDTGEVTYTPLSEADLNSIRQVLIGT 434
           N+ELD +ISH ++Q G +NR +V+V V  +  VN   GE T  P S  +L    +++   
Sbjct: 391 NFELDRSISHTKQQQGRLNRLSVSVVVDDQVKVNAANGETTRAPWSADELARFTRLVQDA 450

Query: 435 VGYSENRGDLLNVLSMPFAEPEMEQIVDVPIWEHPNFNDWVRWFASALVIIIVILVLVRP 494
           VG+  +RGD ++V++MPF+    E I ++P +  P F D V+     L I++++  ++RP
Sbjct: 451 VGFDASRGDSVSVINMPFSAERGEVIAEIPFYSQPWFWDIVKQVLGVLFILVLVFGVLRP 510

Query: 495 AMKKLINPAADNDDQMYGPD---GMPIGADGETSLIGSDIDGGELFEFGSGIDLPNLHKD 551
            +  +     D      G D   G   G DGE S     + G       + I LP+  + 
Sbjct: 511 VLNNITGGGKDKQLAGIGSDMELGGMGGLDGELSNDRVSLGG------PTSILLPSPSEG 564

Query: 552 EDV-LKAVRALVANEPELAAQVVKNWM 577
            D  L A+++LVA +P   AQVVK W+
Sbjct: 565 YDAQLNAIKSLVAEDPGRVAQVVKEWI 591