Pairwise Alignments

Query, 580 a.a., flagellar basal body M-ring protein FliF from Vibrio cholerae E7946 ATCC 55056

Subject, 594 a.a., Flagellar FliF M-ring protein from Pseudomonas syringae pv. syringae B728a

 Score =  279 bits (713), Expect = 3e-79
 Identities = 184/570 (32%), Positives = 301/570 (52%), Gaps = 48/570 (8%)

Query: 47  VGDLDLLRQVVLVLSISICVALIVMLFFWVREPDMRPL-GAYETEELIPVLDYLDQQKQQ 105
           + ++ +LRQ+ L++ ++  VA+   +  W ++PD RPL G+    +   ++D L      
Sbjct: 30  LSEMTMLRQIGLMVGLAASVAIGFAVVLWSQQPDYRPLYGSLAGMDSKQIMDTLTAANIN 89

Query: 106 YKLDGNT--ILVPVSDYNSLKLSMVRAGLNQN-RQAGDEILMQDMGFGVSQRLEQERLKL 162
           Y ++ N+  +LV   D    ++ + +AG+ QN    G EIL +D G G SQ +E  R + 
Sbjct: 90  YTVEPNSGALLVKSDDVQRARIQLAQAGVVQNDANIGFEILDKDQGLGTSQFMEATRYRR 149

Query: 163 SRERQLAKAIEEMRQVNKARVLLALPKQSVFVRHNQEASASVFLTVRTGANLKQEEIDAV 222
             E +LA+ I  +  V  ARV LA+PK SVFVR +++ SASV + +  G +L+  ++ A+
Sbjct: 150 GLEGELARTISALNNVKGARVHLAIPKSSVFVRDDRKPSASVLVELYAGRSLEPSQVMAI 209

Query: 223 VDMVASAVPGMKPSRVTVTDQHGRLLSSGSQDPVSAARRKEQELEKQQEEALRGKIDSVL 282
           +++VA++VP +  S++TV DQ G LLS  +++       K+ +  ++ E  L  ++ ++L
Sbjct: 210 INLVATSVPELSKSQITVVDQKGALLSDQAENSELTMAGKQFDYSRRMEGMLTQRVQNIL 269

Query: 283 IPILGLGNYTAQVDIELDFSAVEQTRKVFDPNTPATRSEYTL-EDYNNGNVVAGVPGALS 341
            PILG   Y A+V   +DFSAVE T + F+P+ PA RSE ++ E  ++ +   GVPGALS
Sbjct: 270 QPILGNDRYKAEVSAVVDFSAVESTAESFNPDQPALRSEQSVNEQRSSSSSSGGVPGALS 329

Query: 342 NQPPADASIPQDVAQMKDGSV---------------------MGQGSV-------HKEAT 373
           NQPP  A+ PQ       G+                       GQ ++         ++T
Sbjct: 330 NQPPGPATAPQTAGGGAAGAAGPIAPGQPLLDANGQQIMDPATGQPALAPYPADKRVQST 389

Query: 374 RNYELDTTISHERKQSGVINRQTVAVAVKSRSSVNPDTGEVTYTPLSEADLNSIRQVLIG 433
           +N+ELD +ISH ++Q G + R +VAV V      N   GEVT  P S ADL    +++  
Sbjct: 390 KNFELDRSISHTKQQQGRLTRLSVAVVVDDMVKTNAANGEVTRAPWSAADLARFTRLVQD 449

Query: 434 TVGYSENRGDLLNVLSMPFAEPEMEQIVDVPIWEHPNFNDWVRWFASALVIIIVILVLVR 493
            VG+  +RGD ++V+++PF+    E + +   +  P F D V+     + I+I++  ++R
Sbjct: 450 AVGFDASRGDSVSVINVPFSSERAEVLPEASFYSQPWFWDIVKQAVGVIFILILVFGVLR 509

Query: 494 PAMKKLINP-----AADNDDQMYGPDGMPIGADGETSLIGSDIDGGELFEFGSGIDLPNL 548
           P +  + N      A    D   G  G   G DGE S     + G +       I LP+ 
Sbjct: 510 PVLNNITNGKRKELAGFGGDAELGGMG---GLDGELSNDRVSLGGPQ------SILLPSP 560

Query: 549 HKDEDV-LKAVRALVANEPELAAQVVKNWM 577
            +  D  L A+++LVA +P   AQVVK W+
Sbjct: 561 TEGYDAQLNAIKSLVAEDPGRVAQVVKEWI 590