Pairwise Alignments

Query, 580 a.a., flagellar basal body M-ring protein FliF from Vibrio cholerae E7946 ATCC 55056

Subject, 557 a.a., flagellar MS-ring protein from Sinorhizobium meliloti 1021

 Score =  143 bits (360), Expect = 2e-38
 Identities = 132/492 (26%), Positives = 223/492 (45%), Gaps = 43/492 (8%)

Query: 109 DGNTILVPVSDYNSLKLSMVRAGLNQNRQAGDEILMQDMGFGVSQRLEQERLKLSRERQL 168
           DG +I VPV      +L +   GL  +  AG E+       G++  +++     + E ++
Sbjct: 79  DGGSIQVPVGMTGKARLLLAERGLPSSANAGYELFDNVGSLGLTSFMQEVTRVRALEGEI 138

Query: 169 AKAIEEMRQVNKARVLLALPKQSVFVRHNQEASASVFLTVRTGANLKQEEIDAVVDMVAS 228
           A+ I+++  +  ARV + +P++  F +  Q  +ASV   +R  A + +    ++  +VAS
Sbjct: 139 ARTIQQISGIAAARVHIVMPERGSFRKAEQTPTASVM--IRASATVGRSAASSIRHLVAS 196

Query: 229 AVPGMKPSRVTVTDQHGRLLSSGSQDPVSAARRKEQELEKQQEEALRGKIDSVLIPILGL 288
           +VPG+    VTV D  G+LL+SG  DP ++A  +   + +  +  L  KID+ L P LG+
Sbjct: 197 SVPGLDVDDVTVLDSTGQLLASG-DDPSNSALNQSLGVVQNVQSDLEKKIDNALAPFLGM 255

Query: 289 GNYTAQVDIELDFSAVEQTRKVFDPNTPATRSEYTLEDYNNGNVVAGVPGALSNQPPADA 348
            N+   V   L+  A +    VFDP +   RS   +++    +           QP   A
Sbjct: 256 DNFRTSVTARLNTDAQQIQETVFDPESRVERSTRVIKEEQKSS---------QQQPDNAA 306

Query: 349 SIPQDVAQMKDGSVMGQGS----VHKEATRNYELDTTISHERKQSGVINRQTVAVAVKSR 404
           ++ Q+V Q       GQ S      KE   NYE+++      K S  I R ++AV V +R
Sbjct: 307 TVQQNVPQAAPRGGAGQQSSDEAEKKEEQTNYEINSKTIATVKNSYSIERLSIAVVV-NR 365

Query: 405 SSVNPDTGEVTYTPLSEADLNSIRQVLIGTVGYSENRGDLLNVLSMPFAEPE-MEQIVDV 463
             +    GE       +A L  +++++    G    RGD++ + +M F E + ++Q V  
Sbjct: 366 GRLAAMAGEPADQAKIDAYLQEMQKIVSSAAGIDPGRGDVVTLNAMDFVETQLLDQAVPG 425

Query: 464 P-IWE--HPNFNDWVRWFASALVIIIVILVLVRPAMKKL--INPAADNDDQMYG---PDG 515
           P I E    N    +   A   V  +V+   +RP  ++L     A   + +  G   PD 
Sbjct: 426 PGIMEMLTRNLGGIINALAFVAVAFLVVWFGMRPLARQLGFGGQAGKLEGEAAGLELPDF 485

Query: 516 MPIGADGETSLI---GSDIDGGELFEFGSGIDLPNLHKDEDVLKAVR--------ALVAN 564
            P GA    +L+   GSD      F F  G DL NL  +    + V+         +V  
Sbjct: 486 SPAGAGAGGALMEGFGSD------FGFDGGDDLLNLGDEAGFNRRVKEGPERRLARMVEI 539

Query: 565 EPELAAQVVKNW 576
             E AA++++ W
Sbjct: 540 SEERAAKILRKW 551