Pairwise Alignments

Query, 580 a.a., flagellar basal body M-ring protein FliF from Vibrio cholerae E7946 ATCC 55056

Subject, 551 a.a., Flagellar FliF M-ring protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  202 bits (514), Expect = 3e-56
 Identities = 145/506 (28%), Positives = 248/506 (49%), Gaps = 38/506 (7%)

Query: 95  VLDYLDQQKQQYKL--DGNTILVPVSDYNSLKLSMVRAGLNQNRQAGDEILMQDMGFGVS 152
           ++  L+++   Y++  DG ++LVP      L++ M  + L      G EI       G +
Sbjct: 57  IIAQLEERNIPYQMANDGRSVLVPSDQVLKLRVQMAESALPSGATVGYEIFDSASALGST 116

Query: 153 QRLEQERLKLSRERQLAKAIEEMRQVNKARVLLALPKQSVFVRHNQEASASVFLTVRTGA 212
           Q  +   +  + E +LA+ +  ++ V  ARV L LPK+  F R     SASV L ++ G 
Sbjct: 117 QFTQNINMVRALEGELARTVRTIQGVEGARVHLVLPKREPFTRDQVAPSASVVLLMK-GR 175

Query: 213 NLKQEEIDAVVDMVASAVPGMKPSRVTVTDQHGRLLSSGSQDPVSAARRKEQELEKQQEE 272
            L+ E++ AV ++VA+AVPGMKP +V++ D+ G LL+ G  +  +   + + EL K +E 
Sbjct: 176 RLQPEQVVAVQNLVAAAVPGMKPGQVSIIDERGTLLTRGMGEEGALIAQNQDELRKAEER 235

Query: 273 ALRGKIDSVLIPILGLGNYTAQVDIELDFSAVEQTRKVFDPNTPATRSEYTLEDYNNGNV 332
            L   I+ +L   +G+G   A+V  ++DF+ +  +R+ FDPN    RS  T+++ N  + 
Sbjct: 236 RLAQSIEQLLERTIGVGKVRAEVVADMDFNRIVTSRESFDPNGQVVRSTTTVDEQNKSS- 294

Query: 333 VAGVPGALSNQPPADASIPQDVAQMKDGSVMGQGSVHK-EATRNYELDTTISHERKQSGV 391
                 A+SN      ++P+       G+   Q S ++ E T NYE+   +++E K++GV
Sbjct: 295 -----DAVSN-VSVQQNLPEAQFAGNGGAPTSQTSENRTEETVNYEITKIVTNEVKEAGV 348

Query: 392 INRQTVAVAVKSRSSVNPDTGEVTYTPLSEADLNSIRQVLIGTVGYSENRGDLLNVLSMP 451
           + R +VAV V   S+ N D G  T+ P S+ ++  I  ++   +GY + RGD + V++M 
Sbjct: 349 VKRLSVAVMVDGTSTTN-DAGVTTWQPRSDDEMQKITSLVRSAMGYDQARGDQIEVVNMQ 407

Query: 452 FAEPEMEQIVDVPIWEHPNFN-----DWVRWFASALVIIIVILVLVRPAMKK-------- 498
           F +P      D   WE   F              A+V I++IL++VRP +++        
Sbjct: 408 FIDPG-ALFDDAAAWEFLGFTKAEVMKMAEGLGVAVVAILIILLVVRPLVQRAFENLPSG 466

Query: 499 -------LINPAADNDDQMYGPDGMPIGADGETSLIGSDIDGGELFEFGSGIDLPNLHKD 551
                  L+     +  Q+ GP G  I A G   +     D  EL +    ID       
Sbjct: 467 ADQGGAGLLTAEMQSHPQLTGPGGGSIPA-GMLGMPDEMDDAEELID----IDKVEGRVK 521

Query: 552 EDVLKAVRALVANEPELAAQVVKNWM 577
              L+ +  +V   PE A  +++NW+
Sbjct: 522 ASSLRKIGEIVDKHPEEALSIIRNWL 547