Pairwise Alignments

Query, 580 a.a., flagellar basal body M-ring protein FliF from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., flagellar M-ring protein FliF from Phaeobacter inhibens DSM 17395

 Score =  135 bits (339), Expect = 6e-36
 Identities = 138/564 (24%), Positives = 253/564 (44%), Gaps = 54/564 (9%)

Query: 50  LDLLRQVVLVLSISICVALIVMLFFWVREPDMRPLGA-YETEELIPVLDYLDQQKQQYKL 108
           LD  ++++ V +  I +  ++ +      P M+ L A  E+     V+  L+Q+  +Y++
Sbjct: 11  LDTRKRLIAVGATVIVILSVLAMSRVANTPTMQLLYAGLESGSAGDVVRALEQRGTEYEV 70

Query: 109 DGNTILVPVSDYNSLKLSMVRAGLNQNRQAGDEILMQDMGFGVSQRLEQERLKLSRERQL 168
            G +I VP +  + L++++   GL  N   G E+L    GFG + ++       ++E +L
Sbjct: 71  RGGSIYVPATARDELRMTLASEGLPANGGRGYELLDSLSGFGTTSQMFDAAYWRAKEGEL 130

Query: 169 AKAIEEMRQVNKARVLLALPKQSVFVRHNQEASASVFLTVRTGANLKQEEIDAVVDMVAS 228
           A+ I     V +ARV +A    + F R   E +ASV + V  G+ +   + +A+  +++S
Sbjct: 131 ARTIVASPHVTQARVHIANTGSNPFQR-TAEPTASVSV-VPMGSPITPAQANAIRFLISS 188

Query: 229 AVPGMKPSRVTVTDQHGRLLSSGSQDPVSAARRKEQELEKQQEEALRGKIDSVLIPILGL 288
           AV G+    V V D +G L+  GS +  +A      +    + +++R ++  ++   +G 
Sbjct: 189 AVTGLAVENVAVIDANGALI--GSPEAAAAVGAGTDD----RSQSIRERVMRLVEARVGH 242

Query: 289 GNYTAQVDIELDFSAVEQTRKVFDPNTPATRSEYTLEDYNNGNVVAGVPGALSNQPPADA 348
           GN   +V +E          K  DP +    S    E  ++    +G     SN P  DA
Sbjct: 243 GNAVVEVSVETVTDTESIREKRIDPESRVAISTDVEERADSSQNQSGEVTVASNIPDGDA 302

Query: 349 SIPQDVAQMKDGSVMGQGSVHKEATRNYELDTTISHERKQSGVINRQTVAVAVKSRSSVN 408
           +         DGS     +  +    NYE+  T     +  G I R TVAV +     + 
Sbjct: 303 A-------SGDGSKASTSATRERV--NYEISETEKEILRGPGAIKRLTVAVLLNG-VPIT 352

Query: 409 PDTGEVTYTPLSEADLNSIRQVLIGTVGYSENRGDLLNV--LSMPFAEPEMEQIVDVPIW 466
             TGE    P SE +L ++R+++   VG+SE RGD++ +  + MP  EP+   +V   I+
Sbjct: 353 TATGETVMEPRSEEELGALRELISAAVGFSEERGDVITLKSMEMPTVEPQ-GTVVSASIF 411

Query: 467 EHPNFN--DWVRWFASALVIIIVILVLVRPAMKK------LINPAADNDDQ--------- 509
           ++   +    ++  A ALV +I+ L ++RP +        L  P  D  D+         
Sbjct: 412 DNIYLDAMSLIQMAALALVTLILGLFVIRPILSNQASVPALGAPGGDAMDELPALGGGGF 471

Query: 510 MYGPD-GMPIGADGETSL-------------IGSDIDGGELFEFGSGIDLPNLHKDED-V 554
           M  P+ G  +  DGE                +G+ +  G++   G    LP L    D  
Sbjct: 472 MANPNLGADLALDGEIENNETGQFEPMGGMGMGTGMGMGDMGGMGDMGGLPALGGGGDNP 531

Query: 555 LKAVRALVANEPELAAQVVKNWMQ 578
           +  +R+++    E   Q+++ W++
Sbjct: 532 VDRLRSMIGERQEETVQILRGWLE 555