Pairwise Alignments

Query, 580 a.a., flagellar basal body M-ring protein FliF from Vibrio cholerae E7946 ATCC 55056

Subject, 569 a.a., flagellar MS-ring protein from Marinobacter adhaerens HP15

 Score =  313 bits (803), Expect = 9e-90
 Identities = 202/557 (36%), Positives = 309/557 (55%), Gaps = 25/557 (4%)

Query: 35  DINEKSSKMDFTVGDLDLLRQVVLVLSISICVALIVMLFFWVREPDMRP----LGAYETE 90
           D  E  S +      L+LLRQ+ L++ ++  VAL + +  W +EP+ +P    L +Y  +
Sbjct: 20  DAPESRSDLFMGFNRLNLLRQIGLMVGLAASVALGLAVVLWAQEPNYQPVVGDLSSYNPQ 79

Query: 91  ELIPVLDYLDQQKQQYKLDGNT--ILVPVSDYNSLKLSMVRAGLNQNRQAGDEILMQDMG 148
           ++  +L+        YK+D  T  +LVP     + +L +   G+   +  G E+L Q+ G
Sbjct: 80  DVTTILE---SNGIDYKMDPRTGALLVPSDQVYNARLKLAAEGVTDRQTMGYELLDQERG 136

Query: 149 FGVSQRLEQERLKLSRERQLAKAIEEMRQVNKARVLLALPKQSVFVRHNQEASASVFLTV 208
            G SQ +E    +   E +LA+ +  MR V  ARV LA+P++SVFVR  ++ SASVFL V
Sbjct: 137 LGTSQFMETISYRRGLEGELARTVASMRGVRNARVHLAIPERSVFVRDARDPSASVFLEV 196

Query: 209 RTGANLKQEEIDAVVDMVASAVPGMKPSRVTVTDQHGRLLSSGSQDPVSAARRKEQ-ELE 267
             G   +QE+I+A+V++VA +VP M    VTV DQ+G LL+ G Q    A +  +Q E  
Sbjct: 197 FAGRRPEQEQINAIVNLVAGSVPMMSKEHVTVVDQNGNLLT-GKQSQSGADQMADQYEYT 255

Query: 268 KQQEEALRGKIDSVLIPILGLGNYTAQVDIELDFSAVEQTRKVFDPNTPATRSEYTLEDY 327
            + EE L  ++ S++ PI+G G Y A+V  +LDFS+VEQ  ++F+P   A RSE  L + 
Sbjct: 256 AKVEERLTRRVASLIGPIVGDGRYRAEVSADLDFSSVEQAEELFNPEQQAVRSERELTER 315

Query: 328 NNGNVVAGVPGALSNQPPADASIPQDVAQMKDGSVMGQG--SVHKEATRNYELDTTISHE 385
                  G+PGAL+NQPPA+A++P+  A   DG        +V  E+TRNYE+D T+S+ 
Sbjct: 316 RTAGAQGGIPGALANQPPANATVPEQAAG-GDGEQAAPAPVNVRSESTRNYEMDRTVSYR 374

Query: 386 RKQSGVINRQTVAVAVKSRSSVNPDTGEVTYTPLSEADLNSIRQVLIGTVGYSENRGDLL 445
           R++ G + R TVA+AV     V+P TGEV+Y P  E +L  +  ++   VGYS  RGD +
Sbjct: 375 RQELGRVKRVTVALAVDDMKVVDPQTGEVSYEPWPEQELQRLSMLVRDAVGYSAARGDSV 434

Query: 446 NVLSMPFAEPEMEQIVDVPIWEHPNFNDWVRWFASALVIIIVILVLVRPAMKKLINPAAD 505
            V++  FA+ E  +      WE P F D ++   + LVI++++L L+RP +K L    + 
Sbjct: 435 TVMNTAFAQEESVEFEAPAFWEQPWFWDLMKQVLAGLVILVLVLGLLRPTLKSL----SG 490

Query: 506 NDDQMYGPDGMPIGADGETSLIGSDIDGG-ELFEFGSGID---LPNLHKDED-VLKAVRA 560
              +  G D       G   L   DI+GG EL +  S  D   LP      D  L A++ 
Sbjct: 491 GGQRERGLDSGSGSGGGYGGL--DDIEGGDELRKAMSAQDDLLLPGATDGYDRQLNALKG 548

Query: 561 LVANEPELAAQVVKNWM 577
           L+A +P   AQV++ W+
Sbjct: 549 LIAEDPARVAQVMRQWV 565