Pairwise Alignments

Query, 580 a.a., flagellar basal body M-ring protein FliF from Vibrio cholerae E7946 ATCC 55056

Subject, 575 a.a., flagellar M-ring protein FliF from Pantoea sp. MT58

 Score =  217 bits (553), Expect = 9e-61
 Identities = 170/563 (30%), Positives = 274/563 (48%), Gaps = 59/563 (10%)

Query: 55  QVVLVLSISICVALIVMLFFWVREPDMRPLGAYETEELI-PVLDYLDQQKQQYKL--DGN 111
           ++ LV++ +  +A+++ +  W ++P    L    T+E    ++  L Q    Y+   +G 
Sbjct: 28  RIPLVIAAAAVIAIVIAMVLWAKQPSYSVLYNNLTDEDGGAIVTQLTQMNIPYRFAENGG 87

Query: 112 TILVPVSDYNSLKLSMVRAGLNQNRQAGDEILMQDMGFGVSQRLEQERLKLSRERQLAKA 171
            ++VP ++ + L+L + + GL +    G E+L ++  FG+SQ  EQ   + + E +LA+ 
Sbjct: 88  ALMVPEANVHELRLRLAQQGLPKGGSVGFELLDKEK-FGISQFSEQVNYQRALEGELART 146

Query: 172 IEEMRQVNKARVLLALPKQSVFVRHNQEASASVFLTVRTGANLKQEEIDAVVDMVASAVP 231
           IE +  V  ARV LA+PK ++FVR  +  SASV LT++ G  L + +I A+  MV+S+V 
Sbjct: 147 IESLGPVKSARVHLAMPKPTLFVREQKAPSASVTLTLQPGRALDEGQIQAIAHMVSSSVA 206

Query: 232 GMKPSRVTVTDQHGRLLS---SGSQDPVSAARRKEQELEKQQEEALRGKIDSVLIPILGL 288
           G+ P  VTV DQ GRLL+   S  +D   A  +   E+E + ++    +I+++L PILG 
Sbjct: 207 GLPPGNVTVVDQTGRLLTRSDSAGRDLNDAQLKYSSEVEARYQQ----RIEAILNPILGQ 262

Query: 289 GNYTAQVDIELDFSAVEQTRKVFDPN----TPATRSEYT-LEDYNNGNVVAGVPGALSNQ 343
           GN  AQV  +++F   EQT + + PN      A RS  T   D +      GVPGALSNQ
Sbjct: 263 GNVHAQVTAQINFDTAEQTDEKYQPNANPSNSAIRSRQTSTSDQSGSPYPGGVPGALSNQ 322

Query: 344 P----PADASIPQDVA---QMKDG----------------SVMGQGSVHKEATRNYELDT 380
           P     A  + P + A   Q  +G                +  G  +  ++ T NYELD 
Sbjct: 323 PAPANTAPVTTPNNNAANGQAANGQNNAANNASQTTSTAPASSGPTNSRRDDTVNYELDR 382

Query: 381 TISHERKQSGVINRQTVAVAVKSRSSVNPDTGEVTYTPLSEADLNSIRQVLIGTVGYSEN 440
           TI H +   G + R +VAV V  R+    D G+     L+E  L  I  +    +GYS++
Sbjct: 383 TIRHTKVNVGDVQRLSVAVVVNFRAD---DKGKA--VALNEQQLKQIEDLTREAMGYSQS 437

Query: 441 RGDLLNVLSMPFAEPEMEQIVDVPIWEHPNFNDWV----RWFASALVIIIVILVLVRPAM 496
           RGD +NV++  F   E     D+P W+  +F D +    +W   ALV  ++   +VRP +
Sbjct: 438 RGDSINVVNSQFNTTE-PVTTDLPFWQQQSFFDQLMDAGKWLLVALVAFVLYRKMVRPHL 496

Query: 497 --KKLINPAADNDDQMYGPDGMPIGADGETSLIGSDIDGGELFEFGSGIDLPNLHKDEDV 554
             K+    AA            P        L   ++D              N    E +
Sbjct: 497 VRKQAAEKAAAEAVAARAATDQPQEEAFNVQLSKDELDQERKSN--------NRMSAEVM 548

Query: 555 LKAVRALVANEPELAAQVVKNWM 577
            + +R +  N+P + A V++ WM
Sbjct: 549 SQRIRDMSENDPRVVALVIREWM 571