Pairwise Alignments

Query, 580 a.a., flagellar basal body M-ring protein FliF from Vibrio cholerae E7946 ATCC 55056

Subject, 555 a.a., flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) from Sphingomonas koreensis DSMZ 15582

 Score =  176 bits (447), Expect = 2e-48
 Identities = 132/438 (30%), Positives = 219/438 (50%), Gaps = 29/438 (6%)

Query: 108 LDG-NTILVPVSDYNSLKLSMVRAGLNQNRQAGDEILMQDMGFGVSQRLEQERLKLSRER 166
           +DG  ++ V   DY+  ++ +   GL +    G  +L Q +  GVS+ +E ERL+ +RE 
Sbjct: 94  IDGAGSLTVGEDDYHKARMLLAGQGLPKAAPGGYALLDQ-LPMGVSRAVEGERLRQARET 152

Query: 167 QLAKAIEEMRQVNKARVLLALPKQSVFVRHNQEASASVFLTVRTGANLKQEEIDAVVDMV 226
           +LA++I E+  V +ARV LA P+ +VFVR   E SASV + ++ G  L   ++ ++V++V
Sbjct: 153 ELARSISEIDTVAEARVHLATPEATVFVRDKAEPSASVIVKLQPGRTLSDAQVRSIVNLV 212

Query: 227 ASAVPGMKPSRVTVTDQHGRLLSSGSQDPVSAARRKEQELEKQQEEALRGKIDSVLIPIL 286
           AS+VPGMK   VT+ DQ G LLS   Q+   +A     + +++ E+  R ++  +L P+L
Sbjct: 213 ASSVPGMKAEAVTIVDQAGALLSKSGQE--GSAGDARIDFQRRIEDKYRQQLVQLLTPLL 270

Query: 287 GLGNYTAQVDIELDFSAVEQTRKVFDPNTPATRSE---YTLEDYNNGNVVAGVPGALSNQ 343
           G GN+TA+V  ++D    + TR+ FD      R+E   +T    +  N   G+PGALSN 
Sbjct: 271 GAGNFTAEVQADVDLDESQATRETFDKAGAVVRAEQGNWTGAPRDGANAPGGIPGALSNV 330

Query: 344 PPADASI----PQDV---AQMKDGSVMGQGSVHKEA-TRNYELDTTISHERKQSGVINRQ 395
            PA + +    P+ V   A          G    ++  R+Y+    IS  R   G I R 
Sbjct: 331 APAPSVVATPTPEGVTAGANQPATPAAAPGMKQSDSFARSYDNAKEISVTRAAPGNIKRL 390

Query: 396 TVAVAVKSRSSVNPDTGEVTYTPLSEADLNSIRQVLIGTVGYSENRGDLLNVLSMPFAEP 455
           +VAV +K          E    P  + ++  I  ++   VG++  R D + V+S  F+  
Sbjct: 391 SVAVLLK----------EEPGKPRGQVEIKQIDDLVKAAVGFNAARQDQVTVVSRKFSTT 440

Query: 456 EMEQIVDVPIWEHPNFNDWVRWFASALVIIIVILVLVRPAMKKLINPAADNDD----QMY 511
                     +E   F    R   + ++ ++V+L+ VRP  K L+    D +      M 
Sbjct: 441 ADAASEGPAFYESGWFAMVARNVTAVVIALLVLLLGVRPLAKALLKKRDDTNRGGALPMG 500

Query: 512 GPDGMPIGADGETSLIGS 529
           G DG+ + A     ++G+
Sbjct: 501 GADGVAMPAPVSAEMLGA 518