Pairwise Alignments

Query, 580 a.a., flagellar basal body M-ring protein FliF from Vibrio cholerae E7946 ATCC 55056

Subject, 538 a.a., flagellar M-ring protein FliF (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  194 bits (493), Expect = 8e-54
 Identities = 148/558 (26%), Positives = 265/558 (47%), Gaps = 41/558 (7%)

Query: 33  NPDINEKSSKMDFTVGDLDLLRQVVLVLSISICVALIVMLFFWVREPDMRPLGA-YETEE 91
           +P I + + K       + + ++V +V    + V +   L  W+  PD R L +    E+
Sbjct: 2   SPMITDATDKARAFWSRISMSQRVFIVGLALVTVGIFFTLILWINRPDYRVLYSNLAGED 61

Query: 92  LIPVLDYLDQQKQQYKL--DGNTILVPVSDYNSLKLSMVRAGLNQNRQAGDEILMQDMGF 149
              V+  L   K  YKL  DG T+LVP      L++ +   G    +  G EI   D+  
Sbjct: 62  ANRVVKLLQANKVPYKLENDGGTVLVPADKLYDLRIKVAGEGNLVGQGIGFEIF-DDLKV 120

Query: 150 GVSQRLEQERLKLSRERQLAKAIEEMRQVNKARVLLALPKQSVFVRHNQEASASVFLTVR 209
           G +  +++   + + + +L + I E   V  ARV L +P +S+F+   Q+ SASV + +R
Sbjct: 121 GQTDFVQKINYQRALQGELIRTISEFPGVETARVHLVIPHRSLFIEEQQKPSASVVVKLR 180

Query: 210 TGANLKQEEIDAVVDMVASAVPGMKPSRVTVTDQHGRLLSSGSQ-DPVSAARRKEQELEK 268
            G  ++ +++ A+V++V  AV GM  +RV+V D  G++L   ++ D +      + E + 
Sbjct: 181 EGKKMEAQDVQAIVNLVVMAVEGMDRNRVSVADTSGKILYYPTEDDSLQGLTTTQLEYKM 240

Query: 269 QQEEALRGKIDSVLIPILGLGNYTAQVDIELDFSAVEQTRKVFDPNTPATRSEYTLEDYN 328
           + ++ L  +I+ +L P++G G   A+V+ ++DFS     R+++DP     RSE   E+  
Sbjct: 241 RLQQNLERRIEELLYPVIGPGKVIAKVNADVDFSQRTIRRELYDPEKTVVRSEQRSEEST 300

Query: 329 NG--NVVAGVPGALSNQPPADASIPQDVAQMKDGSVMGQGSVHKEATRNYELDTTISHER 386
            G  N+ AG P         DA+   D      GS   Q    +  T N+E++    +  
Sbjct: 301 RGRANLEAGAP---------DANFRGDGI---SGSASTQEGTRETRTTNFEINKEEQNIV 348

Query: 387 KQSGVINRQTVAVAVKSRSSVNPDTGEVTYTPLSEADLNSIRQVLIGTVGYSENRGDLLN 446
              G ++R +VAV V        D G  T+ P +  ++  IRQ++   VGY   RGD + 
Sbjct: 349 ANVGDLSRLSVAVIVDGTYEKAAD-GTYTFVPRNAEEMQRIRQLVSSAVGYDRARGDTVE 407

Query: 447 VLSMPFAEPEMEQIVDVPIWEHPNFNDWV----RWFASALVIIIVILVLVRPAMKKLINP 502
           V S+ F  P++ Q   +P      F D+     +   +AL++ + +L++VRP +  LI P
Sbjct: 408 VNSISFGGPDLPQEASLP----QLFLDYALRLGKPLLNALLVFLFLLLVVRPVVMALIRP 463

Query: 503 AADNDDQMYGPDGMPIGADGETSLIG-SDIDGGELFEFGSGIDLPNLHKDEDVLKAVRAL 561
             +  + + G +G+P G +    + G  ++D            L  L K ED+      L
Sbjct: 464 KVEG-EMIEGLEGLPAGEERLALIEGDEEVDA-----------LDALRKIEDIKAHAMQL 511

Query: 562 VANEPELAAQVVKNWMQN 579
                + A  ++++W++N
Sbjct: 512 AEQNMDQAVGIIRSWLKN 529