Pairwise Alignments

Query, 348 a.a., flagellar motor switch protein FliG from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., flagellar motor switch protein FliG from Pseudomonas stutzeri RCH2

 Score =  380 bits (977), Expect = e-110
 Identities = 189/325 (58%), Positives = 256/325 (78%), Gaps = 1/325 (0%)

Query: 25  EKAAILLLSLNEEDAAGIIRHLEPKQVQRVGSAMARAKDLSQTKVSAVHRAFLEDIQKYT 84
           +KAAILLLSL E DAA ++RHL PK+VQRVG+AMA+ +++ +T++  V   F+E +   T
Sbjct: 14  DKAAILLLSLGETDAAQVLRHLGPKEVQRVGTAMAQMRNVQKTQIEQVMSEFVEIVGDQT 73

Query: 85  NIGMGSEDFLRNALVAALGADKANNLVDQILLGTGSKGLDSLKWMDPRQVASIIINEHPQ 144
           ++G+GS+ ++R  L  ALG DKA  L+D+ILLG  + GLDSLKWM+PR VA +I  EHPQ
Sbjct: 74  SLGVGSDGYIRKMLTQALGEDKAGGLIDRILLGGNTSGLDSLKWMEPRAVADVIRYEHPQ 133

Query: 145 IQTIVLSYLEPDQSAEILAQFAQRDALDLLMRIANLEEVQPSALAELNEIMEKQFAGQAG 204
           IQ IV++YL+PDQ+ E+L+ F  +  LD+++R+++L  VQP+AL ELN I+EKQF+G   
Sbjct: 134 IQAIVVAYLDPDQAGEVLSHFDHKVRLDIVLRVSSLNTVQPAALKELNLILEKQFSGSTN 193

Query: 205 AQAAKIGGLKAAADIMNYLDNNIESVLMEGMREKDEDLATQIQDLMFVFENLVEVDDQGI 264
              A +GG+K AADIMNYLD++IE  LM+ +R+ DEDL++QI+DLMFVF+NL EVDD+GI
Sbjct: 194 TSRASLGGVKRAADIMNYLDSSIEGQLMDAIRDVDEDLSSQIEDLMFVFDNLAEVDDRGI 253

Query: 265 QKLLRDVPQDVLQKALKGADDTLREKIFKNMSKRAAEMMKDDLEAMPPIKVSDVEAAQKE 324
           Q LLR+V  DVL  ALKGADD ++EK+FKNMSKRA E+++DDLEA  P++VSDVE AQKE
Sbjct: 254 QVLLREVSSDVLVMALKGADDGIKEKVFKNMSKRAGELLRDDLEAKGPVRVSDVENAQKE 313

Query: 325 ILSIARRMADNGEIMLGG-GADEFL 348
           IL+IARRMA+ GEI+LG  G +E +
Sbjct: 314 ILTIARRMAEAGEIVLGSKGGEEMI 338