Pairwise Alignments

Query, 348 a.a., flagellar motor switch protein FliG from Vibrio cholerae E7946 ATCC 55056

Subject, 347 a.a., flagellar motor switch protein G (RefSeq) from Shewanella loihica PV-4

 Score =  466 bits (1199), Expect = e-136
 Identities = 241/349 (69%), Positives = 288/349 (82%), Gaps = 3/349 (0%)

Query: 1   MAKDNKDGGEVVESTIDISEIPGEEKAAILLLSLNEEDAAGIIRHLEPKQVQRVGSAMAR 60
           M+KD +   +      +  ++ G EK AILLLSL+E DAA I++HLEPKQVQ+VG AMA 
Sbjct: 1   MSKDKEI--DTANGEFNTKDLTGIEKTAILLLSLSEADAASILKHLEPKQVQKVGMAMAA 58

Query: 61  AKDLSQTKVSAVHRAFLEDIQKYTNIGMGSEDFLRNALVAALGADKANNLVDQILLGTGS 120
            KD  Q KV  VH+ FLE++QKY++IG  SE+F+RNAL AALG DKA NL++QI++G G+
Sbjct: 59  MKDFGQNKVIGVHKLFLEEVQKYSSIGFNSEEFVRNALTAALGEDKAGNLIEQIIMGGGA 118

Query: 121 KGLDSLKWMDPRQVASIIINEHPQIQTIVLSYLEPDQSAEILAQFAQRDALDLLMRIANL 180
           KGL+SLKWMD RQVA+II NEHPQIQTIVLSYLEPDQ+AEI AQ  +   LDL+MRIANL
Sbjct: 119 KGLESLKWMDARQVATIIQNEHPQIQTIVLSYLEPDQAAEIFAQAPENTRLDLMMRIANL 178

Query: 181 EEVQPSALAELNEIMEKQFAGQAGAQAAKIGGLKAAADIMNYLDNNIESVLMEGMREKDE 240
           EEVQP+AL ELN+IMEKQFAGQ GAQAAK+GGLKAAA+IMNYLD  +ES LME +RE DE
Sbjct: 179 EEVQPAALQELNDIMEKQFAGQGGAQAAKMGGLKAAANIMNYLDTGVESQLMETLRETDE 238

Query: 241 DLATQIQDLMFVFENLVEVDDQGIQKLLRDVPQDVLQKALKGADDTLREKIFKNMSKRAA 300
           ++A QIQDLMFVFENL +VDD GIQ LLR+V QDVL KALKGADD L+EKI  NMSKRAA
Sbjct: 239 EMAQQIQDLMFVFENLADVDDMGIQTLLREVQQDVLMKALKGADDQLKEKILGNMSKRAA 298

Query: 301 EMMKDDLEAMPPIKVSDVEAAQKEILSIARRMADNGEIMLGG-GADEFL 348
           E++KDDLEAM PI++S+VE AQKEILSIARR++D GEI+LGG G +EFL
Sbjct: 299 ELLKDDLEAMGPIRISEVEVAQKEILSIARRLSDAGEIILGGSGGEEFL 347