Pairwise Alignments

Query, 348 a.a., flagellar motor switch protein FliG from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., flagellar motor switch protein FliG (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  474 bits (1219), Expect = e-138
 Identities = 241/346 (69%), Positives = 290/346 (83%), Gaps = 1/346 (0%)

Query: 4   DNKDGGEVVESTIDISEIPGEEKAAILLLSLNEEDAAGIIRHLEPKQVQRVGSAMARAKD 63
           +NK        + ++ ++ G EK AILLLSL+E DAA I++HLEPKQVQ+VG AMA  +D
Sbjct: 3   ENKSKDAAETPSFNVKDLSGIEKTAILLLSLSEADAASILKHLEPKQVQKVGMAMAAMED 62

Query: 64  LSQTKVSAVHRAFLEDIQKYTNIGMGSEDFLRNALVAALGADKANNLVDQILLGTGSKGL 123
             Q KV  VH+ FL+DIQKY++IG  SE+F+R AL AALG DKA NL++QI++G+G+KGL
Sbjct: 63  FGQEKVIGVHKLFLDDIQKYSSIGFNSEEFVRKALTAALGEDKAGNLIEQIIMGSGAKGL 122

Query: 124 DSLKWMDPRQVASIIINEHPQIQTIVLSYLEPDQSAEILAQFAQRDALDLLMRIANLEEV 183
           DSLKWMD RQVA+II NEHPQIQTIVLSYLEPDQ+AEI  QF +   LDL+MRIANLEEV
Sbjct: 123 DSLKWMDARQVATIIQNEHPQIQTIVLSYLEPDQAAEIFGQFPENTRLDLMMRIANLEEV 182

Query: 184 QPSALAELNEIMEKQFAGQAGAQAAKIGGLKAAADIMNYLDNNIESVLMEGMREKDEDLA 243
           QP+AL ELN+IMEKQFAGQ GAQAAK+GGLKAAA+IMNYLD  +ES LME MRE DE++A
Sbjct: 183 QPAALQELNDIMEKQFAGQGGAQAAKMGGLKAAANIMNYLDTGVESQLMETMRETDEEMA 242

Query: 244 TQIQDLMFVFENLVEVDDQGIQKLLRDVPQDVLQKALKGADDTLREKIFKNMSKRAAEMM 303
            QIQDLMFVFENL++VDD+GIQ LLR+V QDVL KALKGADD L++KI  NMSKRAAE++
Sbjct: 243 QQIQDLMFVFENLIDVDDRGIQTLLREVQQDVLMKALKGADDQLKDKILGNMSKRAAELL 302

Query: 304 KDDLEAMPPIKVSDVEAAQKEILSIARRMADNGEIML-GGGADEFL 348
           +DDLEAM PI++S+VE AQKEILSIARR++D+GEIML GGG DEFL
Sbjct: 303 RDDLEAMGPIRISEVEIAQKEILSIARRLSDSGEIMLGGGGGDEFL 348