Pairwise Alignments

Query, 348 a.a., flagellar motor switch protein FliG from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., flagellar motor switch protein FliG (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  214 bits (544), Expect = 3e-60
 Identities = 109/330 (33%), Positives = 200/330 (60%), Gaps = 1/330 (0%)

Query: 20  EIPGEEKAAILLLSLNEEDAAGIIRHLEPKQVQRVGSAMARAKDLSQTKVSAVHRAFLED 79
           ++ G EK A+LLL++ ++  + + + ++ +++  V  A+   + + +  V  V R F   
Sbjct: 9   QLKGPEKTAVLLLAMGDKFTSEVFKRMDRQEIAAVSKAIVEMETVPKEVVEDVLREFHHA 68

Query: 80  IQKYTNIGMGSEDFLRNALVAALGADKANNLVDQILLGTGSKGLDSLKWMDPRQVASIII 139
           +     +  G +D ++  L+  L ++ A  ++DQ+ L +G      L  + PR +A I+ 
Sbjct: 69  LVTGQEMIAGGQDAVKRLLMKNLDSETAKYIMDQLNLESGPAPFRELGNISPRLLAQILR 128

Query: 140 NEHPQIQTIVLSYLEPDQSAEILAQFAQRDALDLLMRIANLEEVQPSALAELNEIMEKQF 199
           NEHPQ   ++L ++  +++A++L         ++LMR+A LE V    L E++++++ Q 
Sbjct: 129 NEHPQTLALILGHMPSERAADLLTNLPAGVRTEVLMRLARLEAVPEDMLMEVDKVLQSQL 188

Query: 200 AGQAGAQAAKIGGLKAAADIMNYLDNNIESVLMEGMREKDEDLATQIQDLMFVFENLVEV 259
               G +  K+GG+++ A+I+N +D   E  ++  + E+   +A  I++LMFVFE++  +
Sbjct: 189 IAMGGKEGKKVGGVQSVAEILNAVDRATEEEVIAEIEEESAQMAEDIRNLMFVFEDVSSL 248

Query: 260 DDQGIQKLLRDVPQDVLQKALKGADDTLREKIFKNMSKRAAEMMKDDLEAMPPIKVSDVE 319
           DD+GI++LL+D+  + L  AL+G+ D L+EK FKNMS+RAA M+++DLE M P ++SDVE
Sbjct: 249 DDRGIRELLKDISNEDLTMALRGSADDLKEKFFKNMSERAATMIREDLEIMGPTRLSDVE 308

Query: 320 AAQKEILSIARRMADNGEIMLG-GGADEFL 348
           AAQ+ I+   RR+   G +M+G GG D F+
Sbjct: 309 AAQQNIVKTVRRLEAEGRVMIGRGGGDVFV 338