Pairwise Alignments

Query, 348 a.a., flagellar motor switch protein FliG from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., flagellar motor switch protein G (RefSeq) from Shewanella sp. ANA-3

 Score =  476 bits (1225), Expect = e-139
 Identities = 243/346 (70%), Positives = 291/346 (84%), Gaps = 1/346 (0%)

Query: 4   DNKDGGEVVESTIDISEIPGEEKAAILLLSLNEEDAAGIIRHLEPKQVQRVGSAMARAKD 63
           +NK       S+ +I ++ G EK AILLLSL+E DAA I++HLEPKQVQ+VG AMA  +D
Sbjct: 3   ENKSKDAAETSSFNIKDLSGIEKTAILLLSLSEADAASILKHLEPKQVQKVGMAMAAMED 62

Query: 64  LSQTKVSAVHRAFLEDIQKYTNIGMGSEDFLRNALVAALGADKANNLVDQILLGTGSKGL 123
             Q KV  VH+ FL+DIQKY++IG  SE+F+R AL AALG DKA NL++QI++G+G+KGL
Sbjct: 63  FGQEKVIGVHKLFLDDIQKYSSIGFNSEEFVRKALTAALGEDKAGNLIEQIIMGSGAKGL 122

Query: 124 DSLKWMDPRQVASIIINEHPQIQTIVLSYLEPDQSAEILAQFAQRDALDLLMRIANLEEV 183
           DSLKWMD RQVA+II NEHPQIQTIVLSYLEPDQ+AEI  QF +   LDL+MRIANLEEV
Sbjct: 123 DSLKWMDARQVATIIQNEHPQIQTIVLSYLEPDQAAEIFGQFPENTRLDLMMRIANLEEV 182

Query: 184 QPSALAELNEIMEKQFAGQAGAQAAKIGGLKAAADIMNYLDNNIESVLMEGMREKDEDLA 243
           QP+AL ELN+IMEKQFAGQ GAQAAK+GGLKAAA+IMNYLD  +ES LME MRE DE++A
Sbjct: 183 QPAALQELNDIMEKQFAGQGGAQAAKMGGLKAAANIMNYLDTGVESQLMETMRETDEEMA 242

Query: 244 TQIQDLMFVFENLVEVDDQGIQKLLRDVPQDVLQKALKGADDTLREKIFKNMSKRAAEMM 303
            QIQDLMFVFENL++VDD+GIQ LLR+V QDVL KALKGADD L++KI  NMSKRAAE++
Sbjct: 243 QQIQDLMFVFENLIDVDDRGIQTLLREVQQDVLMKALKGADDQLKDKILGNMSKRAAELL 302

Query: 304 KDDLEAMPPIKVSDVEAAQKEILSIARRMADNGEIML-GGGADEFL 348
           +DDLEAM PI++S+VE AQKEILSIARR++D+GEIML GGG DEFL
Sbjct: 303 RDDLEAMGPIRISEVEIAQKEILSIARRLSDSGEIMLGGGGGDEFL 348