Pairwise Alignments

Query, 270 a.a., flagellar assembly protein FliH from Vibrio cholerae E7946 ATCC 55056

Subject, 232 a.a., Flagellar biosynthesis/type III secretory pathway protein from Pseudomonas stutzeri RCH2

 Score = 74.7 bits (182), Expect = 2e-18
 Identities = 44/194 (22%), Positives = 98/194 (50%), Gaps = 15/194 (7%)

Query: 78  AAQQEGFEAGQAEGYQQGFEQGKAEGFQAGHQEGQTQGYQDGVAEGQAL-IQEQVKTFMA 136
           A      +   A+G+Q+G ++G  EG + G + G  +G+Q GV +G+AL ++E  +    
Sbjct: 33  AGDPAALQRAVADGFQEGIDKGYREGLEQGREAGHREGFQRGVEDGKALGLEEGRQQGRR 92

Query: 137 LANQFAQPLDLLNAQVE-----------KQLVDMVLALTKEVVHVEVQTNPQVILDTVKA 185
             ++  +PLD L    E           ++L+++V  + ++V+  E+  +P  +L   + 
Sbjct: 93  AFDEAGRPLDRLIEAFEGFRQEYEQARREELLELVQKVARQVIRCELTLHPTQLLTLAEE 152

Query: 186 SVEALPIAGHAITLKLNPEDVEIIRQAYGEQEIETRNWTLLSEPALSRGDVQIEAGESSV 245
           ++ A+P     + ++LNPE+   IR+   E+      W L+ +  L+ G+ ++   ++  
Sbjct: 153 ALNAMPGDQEDVRIQLNPEECARIRELAPER---AAAWRLVPDEKLALGECRVLTAQAEA 209

Query: 246 SYRMEERIRSVLKS 259
               ++R+ S +++
Sbjct: 210 DIGCQQRLDSCMET 223