Pairwise Alignments

Query, 270 a.a., flagellar assembly protein FliH from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., Flagellar biosynthesis/type III secretory pathway protein from Pseudomonas stutzeri RCH2

 Score = 70.9 bits (172), Expect = 3e-17
 Identities = 50/234 (21%), Positives = 102/234 (43%), Gaps = 25/234 (10%)

Query: 27  RWGLPDYGAESNKAAKQTAFNYDPGWIPNFDEPEQVVEHEFSEEEIAL--IRTAAQQEGF 84
           RW LP +  +  +             +P     EQ VE     E++ +  ++     E  
Sbjct: 20  RWSLPSFDPQGEEQL-----------VPAAAVVEQPVEELARSEDVPVEEVKPLTLDE-L 67

Query: 85  EAGQAEGYQQGFEQGKAEGFQAGHQEGQTQGYQDGVAEGQALIQEQVKTFMALANQFAQP 144
           EA + + Y +GF  G+ +GF AG  + +         E  A +  +V++   L  Q   P
Sbjct: 68  EAIRQQAYNEGFATGEKDGFHAGQLKARQ--------EADAALAPRVESLERLMGQLLDP 119

Query: 145 LDLLNAQVEKQLVDMVLALTKEVVHVEVQTNPQVILDTVKASVEALPIAGHAITLKLNPE 204
           +   +  +E  +  +V  + +EV+  ++  +   I   ++ +++ LP+    + + +NP+
Sbjct: 120 IADQDRNLEHAMATLVSHMAREVIQRDLLIDSSQIRQVLREALKLLPMGASNVRIHVNPQ 179

Query: 205 DVEIIRQAYGEQEIETRNWTLLSEPALSRGDVQIEAGESSVSYRMEERIRSVLK 258
           D E+I+     +E    +W +L + +L  G   IE   S +   +E R+   +K
Sbjct: 180 DFELIKAL---RERHEESWRILEDSSLLPGGCHIETEHSRIDASIETRLTQAIK 230