Pairwise Alignments

Query, 270 a.a., flagellar assembly protein FliH from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., flagellar assembly protein H (RefSeq) from Shewanella amazonensis SB2B

 Score =  152 bits (383), Expect = 1e-41
 Identities = 80/239 (33%), Positives = 135/239 (56%), Gaps = 5/239 (2%)

Query: 28  WGLPDYGAESNKAAKQTAFNYDPGWIPNFDEPEQVVEHEFSEEEIALIRTAAQQEGFEAG 87
           W LPD  + + +          PG      E E++     +E  I  IR  A+QEG  AG
Sbjct: 22  WRLPDMSS-AREEEPANLLGRRPGQTFVPQEEEEIRPPTLAE--IEAIRAEAEQEGLAAG 78

Query: 88  QAEGYQQGFEQGKAEGFQAGHQEGQTQGYQDGVAEGQALIQEQVKTFMALANQFAQPLDL 147
            AEG  QG E G+ +G + GH+EG  QG++ G+A+G       +  F  L  QFA P+ +
Sbjct: 79  HAEGLAQGLEAGRLQGLKEGHEEGVRQGHEQGMAQGLEDAARMIARFEGLIEQFAAPMAV 138

Query: 148 LNAQVEKQLVDMVLALTKEVVHVEVQTNPQVILDTVKASVEALPIAGHAITLKLNPEDVE 207
           L+ ++E++L+ + + L K+++  E++T+P+ +L  ++  V+ LP+    + ++LNP+DV 
Sbjct: 139 LDNEIEQELLSLAMGLAKQILQHELKTHPEHVLAALREGVDCLPLKEQQVKIRLNPQDVT 198

Query: 208 IIRQAYGEQEIETRNWTLLSEPALSRGDVQIEAGESSVSYRMEERIRSVLKSFCGINRH 266
           ++   YG  EI  + W L S+P L++G++ I++  S V  R+E RI +VL +   I RH
Sbjct: 199 LVSSLYGPDEITRKQWQLESDPLLAQGELVIDSQRSRVDMRLENRIAAVLAA--PIERH 255