Pairwise Alignments

Query, 270 a.a., flagellar assembly protein FliH from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., flagellar assembly protein FliH (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  149 bits (376), Expect = 7e-41
 Identities = 81/247 (32%), Positives = 130/247 (52%), Gaps = 3/247 (1%)

Query: 20  DATVTPQRWGLPDYGAESNKAAKQTAFNYDPGWIPNFDEPEQVVEHEFSEEEIALIRTAA 79
           DA +    W LPD   E+   +    F Y     P     E V     +E E   IR  A
Sbjct: 22  DAEIEFSHWQLPDV-TETEDVSISNLFGYSAQQAPKAVAVETVAPPTMAEIED--IRAQA 78

Query: 80  QQEGFEAGQAEGYQQGFEQGKAEGFQAGHQEGQTQGYQDGVAEGQALIQEQVKTFMALAN 139
           ++EGF  G+ +G+ +G EQG+ EG + GH+EG TQG++ G+  G A  +  +  F  L  
Sbjct: 79  EEEGFNEGKTQGHIEGLEQGRLEGLEQGHKEGFTQGHEQGLETGLAEAKALLSRFEGLLC 138

Query: 140 QFAQPLDLLNAQVEKQLVDMVLALTKEVVHVEVQTNPQVILDTVKASVEALPIAGHAITL 199
           QF +PL LL+  +E  L+ + +AL K V+  E++T+P+ IL  ++  VE+LPI    + L
Sbjct: 139 QFEKPLQLLDGDIEHTLMSLTMALAKSVIGHELKTHPEQILSALRLGVESLPIKEQTVNL 198

Query: 200 KLNPEDVEIIRQAYGEQEIETRNWTLLSEPALSRGDVQIEAGESSVSYRMEERIRSVLKS 259
           +++P+DV ++   Y   ++    W L ++P+L+ GD  I +  S V   +  RI +V +S
Sbjct: 199 RMHPDDVTLVETLYSSTQLTRNQWQLEADPSLTAGDCIISSQRSLVDLTLSSRIDAVFES 258

Query: 260 FCGINRH 266
                 H
Sbjct: 259 LRNQQSH 265