Pairwise Alignments

Query, 270 a.a., flagellar assembly protein FliH from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., flagellar assembly protein H (RefSeq) from Shewanella sp. ANA-3

 Score =  156 bits (395), Expect = 5e-43
 Identities = 80/247 (32%), Positives = 134/247 (54%), Gaps = 3/247 (1%)

Query: 20  DATVTPQRWGLPDYGAESNKAAKQTAFNYDPGWIPNFDEPEQVVEHEFSEEEIALIRTAA 79
           D+ +    W LPD   ++ + +    F Y P   P     E +     +E E   IR  A
Sbjct: 21  DSEIEFSHWQLPDV-TQTEEVSISNLFGYSPQQAPKAVAAETIAPPTMAEIED--IRAQA 77

Query: 80  QQEGFEAGQAEGYQQGFEQGKAEGFQAGHQEGQTQGYQDGVAEGQALIQEQVKTFMALAN 139
           ++EGF  G+ +GY +G EQG+ EG + GH EG  QG++ G+  G A  +  V  F  L +
Sbjct: 78  EEEGFNEGKTQGYAEGLEQGRLEGLEQGHTEGLAQGHEQGLEAGLAEAKALVSRFEGLLS 137

Query: 140 QFAQPLDLLNAQVEKQLVDMVLALTKEVVHVEVQTNPQVILDTVKASVEALPIAGHAITL 199
           QF +PL LL+  +E  L+ + +AL K V+  E++T+P+ IL  ++  VE+LPI   ++++
Sbjct: 138 QFEKPLQLLDGDIEHSLMTLTMALAKSVIGHELKTHPEQILSALRLGVESLPIKEQSVSI 197

Query: 200 KLNPEDVEIIRQAYGEQEIETRNWTLLSEPALSRGDVQIEAGESSVSYRMEERIRSVLKS 259
           +++P+DV ++ Q Y   ++    W L ++P+L+ GD  I +  S V   +  RI +V +S
Sbjct: 198 RMHPDDVALVEQLYSSTQLNRNQWQLEADPSLNSGDCIISSQRSLVDLTLSSRIDAVFES 257

Query: 260 FCGINRH 266
                 H
Sbjct: 258 LRNQQSH 264