Pairwise Alignments

Query, 439 a.a., flagellum-specific ATP synthase FliI from Vibrio cholerae E7946 ATCC 55056

Subject, 458 a.a., ATP synthase, F1 beta subunit from Pseudomonas stutzeri RCH2

 Score =  179 bits (455), Expect = 1e-49
 Identities = 122/379 (32%), Positives = 201/379 (53%), Gaps = 12/379 (3%)

Query: 21  MASGKLVRVVGLTLEATGCKAPVGSLCKVETMNG-EMEAEVVGFSGDNL---FLMPSEQI 76
           M+SG++V+++G  ++    +  V ++     + G E   EV    GD +     M S + 
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRDLVPNVYDALKVQGAETTLEVQQQLGDGIVRTIAMGSTE- 59

Query: 77  IGVLPGAKVTPITTESGLPVGMELLGRVIDGVGNPLDGLGPIYTDQRASLNAIPINPLAR 136
            G+  G  V    T   +PVG + LGR++D +GNP+D  GPI  ++R +++    +   +
Sbjct: 60  -GLKRGLDVVNTGTGISVPVGKQTLGRIMDVLGNPIDEAGPIGEEERWTIHRAAPSYAEQ 118

Query: 137 KPINEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLGMMTRGTTAQ---VVVVGLI 193
              NE L+ GIK I+ +    KG ++GLF G+GVGK+V +  + R    +     V   +
Sbjct: 119 AGGNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAMEHSGYSVFAGV 178

Query: 194 GERGREVKEFIEEILGVDGRQRSVVVAAPADSSPLMRLKGCQTALTIAEYFRDQGLDVLL 253
           GER RE  +F  E+   +   +  +V    +  P  RL+   T LT+AE FRD+G DVLL
Sbjct: 179 GERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLL 238

Query: 254 LMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGGPHQGSITAFFTVL 313
            +D++ R+  A  E++  +G  P+  GY P++  ++  L ER  +     GSIT+   V 
Sbjct: 239 FVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITS--TKNGSITSVQAVY 296

Query: 314 TEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVSRVM-PQITTDEHLLMS 372
              DDL DP    + A LD  +VLSR++A  G YPA+D   S SR + P +   EH   +
Sbjct: 297 VPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYDTA 356

Query: 373 KAVRQILSVCRKNQDLVSI 391
           + V+ +L   ++ +D+++I
Sbjct: 357 RGVQYVLQRYKELKDIIAI 375