Pairwise Alignments

Query, 439 a.a., flagellum-specific ATP synthase FliI from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., type III secretion cytoplasmic ATPase HrcN from Pseudomonas syringae pv. syringae B728a

 Score =  309 bits (792), Expect = 1e-88
 Identities = 180/424 (42%), Positives = 254/424 (59%), Gaps = 13/424 (3%)

Query: 24  GKLVRVVGLTLEATGCKAPVGSLCKVETMNGEME-AEVVGFSGDNLFLMPSEQIIGVLPG 82
           G++  V G+ LE     A VG LC+V   +G +  AE+VGF+ +   L       G+  G
Sbjct: 26  GRVSAVRGILLECKIPSAKVGDLCEVSKADGSLLLAEIVGFTQECTLLSALGPPDGIQVG 85

Query: 83  AKVTPITTESGLPVGMELLGRVIDGVGNPLDG------LGPIYTDQRASLNAIP--INPL 134
           A + P+     + V   LLG V+DG G PL G       GP   D+R +L  I   + P 
Sbjct: 86  APIRPLGVAHRIGVDDSLLGCVLDGFGRPLMGDCLGAFAGP--EDRRTTLPVIADALPPT 143

Query: 135 ARKPINEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIG 194
            R  I   L  GI+AI+  + +G+GQR+GLFAG+G GK+  +  + R     V+V GLIG
Sbjct: 144 QRPRITRALPTGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDCDVIVFGLIG 203

Query: 195 ERGREVKEFIEEILGVDGRQRSVVVAAPADSSPLMRLKGCQTALTIAEYFRDQGLDVLLL 254
           ERGRE++EF++  L    R+RSV+V A +D S + R +   TA  IAE FR +G  VLLL
Sbjct: 204 ERGRELREFLDHELDETLRRRSVLVCATSDRSSMERARAAFTATAIAEAFRARGQKVLLL 263

Query: 255 MDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGGPHQGSITAFFTVLT 314
           +DSLTRFA+AQREI ++ GEP    G PPSV+  LP LVERAG      GSITA +TVL 
Sbjct: 264 LDSLTRFARAQREIGIASGEPLGRGGLPPSVYTLLPRLVERAGMS--ENGSITALYTVLI 321

Query: 315 EGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVSRVMPQITTDEHLLMSKA 374
           E D + DP+AD  R++LDGHIVLSR++A+ GHYPAIDV  S+SR++  +T  EH   +  
Sbjct: 322 EQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTGREHQRANNR 381

Query: 375 VRQILSVCRKNQDLVSIGAYKPGTDKAIDAAFTLKPKLDQYLQQAMKETVPYDMCVNMLR 434
           +RQ+L+  ++ + L+ +G Y+ G D   D A  L   ++ +L+Q ++E VP    ++ L 
Sbjct: 382 LRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNEAINAFLRQDLREPVPLQETLDRLL 441

Query: 435 HVLS 438
            + S
Sbjct: 442 QLTS 445