Pairwise Alignments

Query, 439 a.a., flagellum-specific ATP synthase FliI from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., SctN family type III secretion system ATPase PscN from Pseudomonas aeruginosa PA14

 Score =  342 bits (877), Expect = 1e-98
 Identities = 195/428 (45%), Positives = 264/428 (61%), Gaps = 7/428 (1%)

Query: 10  QYKVEGHTTRPMA-SGKLVRVVGLTLEATGCKAPVGSLCKVETMNGEME--AEVVGFSGD 66
           ++ +EG   RP+   G++ +V G  L+A      +G LC++   +  +   AEV+GF   
Sbjct: 2   RHAIEG--CRPIQIRGRVTQVTGTLLKAVVPGVRIGELCQLRNPDQSLALLAEVIGFQQH 59

Query: 67  NLFLMPSEQIIGVLPGAKVTPITTESGLPVGMELLGRVIDGVGNPLDGLGPIYTDQRASL 126
              L P  +++GV    +V+P      + VG  LLG+V+DG+G P DG  P        +
Sbjct: 60  QALLTPLGEMLGVSSNTEVSPTGGMHRVAVGEHLLGQVLDGLGRPFDGSPPAEPAAWYPV 119

Query: 127 NAIPINPLARKPINEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLGMMTRGTTAQ 186
                 P++R+ I  PL +G++AI+GLLT G+GQR+G+FA +G GKS  L  + R     
Sbjct: 120 YRDAPQPMSRRLIERPLSLGVRAIDGLLTCGEGQRMGIFAAAGGGKSTLLASLVRNAEVD 179

Query: 187 VVVVGLIGERGREVKEFIEEILGVDGRQRSVVVAAPADSSPLMRLKGCQTALTIAEYFRD 246
           V V+ L+GERGREV+EFIE  LG  G +RSV+V A +D   + R K    A +IAEYFRD
Sbjct: 180 VTVLALVGERGREVREFIESDLGEQGLRRSVLVVATSDRPAMERAKAGFVATSIAEYFRD 239

Query: 247 QGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGGPHQGSI 306
           QG  VLLLMDSLTRFA+AQREI L+ GEPP  +GYPPSVFA LP L+ERAG     +GSI
Sbjct: 240 QGRRVLLLMDSLTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQS--ERGSI 297

Query: 307 TAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVSRVMPQITTD 366
           TA +TVL EGDD+ +P+AD +R+ILDGHIVLSR++A A HYPAIDV  SVSRVM QI  D
Sbjct: 298 TALYTVLVEGDDMSEPVADETRSILDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVDD 357

Query: 367 EHLLMSKAVRQILSVCRKNQDLVSIGAYKPGTDKAIDAAFTLKPKLDQYLQQAMKETVPY 426
           +    +  +R+ L+   + + L+ IG Y+ G D   D A      + Q+L+Q   ET  Y
Sbjct: 358 DQRHAAGRLREWLAKYEEVELLLKIGEYQKGQDSEADQAIEKIGAIRQWLRQGTHETSDY 417

Query: 427 DMCVNMLR 434
                 LR
Sbjct: 418 AQACAQLR 425