Pairwise Alignments

Query, 439 a.a., flagellum-specific ATP synthase FliI from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., flagellum-specific ATP synthase (RefSeq) from Shewanella loihica PV-4

 Score =  590 bits (1522), Expect = e-173
 Identities = 296/430 (68%), Positives = 358/430 (83%)

Query: 4   LADRLAQYKVEGHTTRPMASGKLVRVVGLTLEATGCKAPVGSLCKVETMNGEMEAEVVGF 63
           L D+L Q+        P ASG+LVRVVGLTLEATGCKAPVGSLC + TM G++ AEV+GF
Sbjct: 8   LLDKLRQHTQAVAPFMPEASGQLVRVVGLTLEATGCKAPVGSLCSIATMAGDLIAEVIGF 67

Query: 64  SGDNLFLMPSEQIIGVLPGAKVTPITTESGLPVGMELLGRVIDGVGNPLDGLGPIYTDQR 123
               L+LMP E++ GV+PGAKVTP+  ++GL VGM LLGRV+DG G P+DGLG ++TDQ+
Sbjct: 68  DDKLLYLMPIEELSGVMPGAKVTPLGEQTGLNVGMGLLGRVLDGNGAPIDGLGQLHTDQK 127

Query: 124 ASLNAIPINPLARKPINEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLGMMTRGT 183
           A+ +A  +NPLAR+ I+EPLDVG++AIN +LTVGKGQR+GLFAGSGVGKSV LGMMTRGT
Sbjct: 128 ATRHATMLNPLARRAISEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVLLGMMTRGT 187

Query: 184 TAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVAAPADSSPLMRLKGCQTALTIAEY 243
           TA V+VVGL+GERGREVKEFIEEILG +GR RSVVVAAPAD+SPLMRL+ C+T+  IAEY
Sbjct: 188 TADVIVVGLVGERGREVKEFIEEILGAEGRSRSVVVAAPADTSPLMRLRACETSTRIAEY 247

Query: 244 FRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGGPHQ 303
           FRD G +VLLLMDSLTR+AQAQREIAL+VGEPPATKGYPPSVFAKLP LVERAGNGG  Q
Sbjct: 248 FRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPKLVERAGNGGAGQ 307

Query: 304 GSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVSRVMPQI 363
           GSITAF+TVLTEGDDLQDPIADA+RAILDGHIVLSR +AD+GHYPAIDVE S+SRV P +
Sbjct: 308 GSITAFYTVLTEGDDLQDPIADAARAILDGHIVLSRALADSGHYPAIDVEASISRVAPMV 367

Query: 364 TTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGTDKAIDAAFTLKPKLDQYLQQAMKET 423
            +D HL  ++ V+Q+ S+ ++N+DL+SIGAY  G+D  ID A  L+P ++ +L+Q MKE 
Sbjct: 368 ISDAHLEATRRVKQMYSLYQQNRDLISIGAYTQGSDPRIDNAIRLQPAMNAFLRQTMKEA 427

Query: 424 VPYDMCVNML 433
           + +D    ML
Sbjct: 428 ISFDSSALML 437