Pairwise Alignments

Query, 439 a.a., flagellum-specific ATP synthase FliI from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., type III secretion system ATPase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  367 bits (941), Expect = e-106
 Identities = 198/416 (47%), Positives = 274/416 (65%), Gaps = 4/416 (0%)

Query: 24  GKLVRVVGLTLEATGCKAPVGSLCKVETM--NGEMEAEVVGFSGDNLFLMPSEQIIGVLP 81
           G++ +VVG  + A      VG LC +     N  + AEVVGF      L P   + GV P
Sbjct: 24  GRVEQVVGTIIRAVVPGVKVGELCILRNPWENWTLRAEVVGFVKQVALLTPLGDLQGVSP 83

Query: 82  GAKVTPITTESGLPVGMELLGRVIDGVGNPLDGLGPIYTDQRASLNAIPINPLARKPINE 141
             +V P      +PVG +LLGRV+DG+G P+DG  P+    R  + A P NP+ R+ I+ 
Sbjct: 84  ATEVIPTGEILSIPVGEDLLGRVLDGLGEPMDGGPPLKPRTRYPVYAQPPNPMQRRIIDR 143

Query: 142 PLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVK 201
           P+ +G++ ++G+LT G+GQR+G+FA +G GKS  L  + +G +A V V+ LIGERGREV+
Sbjct: 144 PISLGLRVLDGVLTCGEGQRMGIFAAAGGGKSTLLSSIIKGCSADVCVLALIGERGREVR 203

Query: 202 EFIEEILGVDGRQRSVVVAAPADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRF 261
           EFIE  LG +GR+++V+V + +D S + RLK   TA  IAEYFRDQ   VLL+MDS+TRF
Sbjct: 204 EFIEHDLGPEGRKKAVLVVSTSDRSSMERLKAAYTATAIAEYFRDQRRSVLLMMDSVTRF 263

Query: 262 AQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQD 321
            +AQREI L+ GEPP  +G+PPSVF+ LP L+ERAGN    +GSITA +TVL EGDD+ +
Sbjct: 264 GRAQREIGLAAGEPPTRRGFPPSVFSTLPRLMERAGNS--DKGSITALYTVLVEGDDMTE 321

Query: 322 PIADASRAILDGHIVLSREMADAGHYPAIDVEKSVSRVMPQITTDEHLLMSKAVRQILSV 381
           PIAD +R+ILDGHIVLSR++A A HYPAIDV+ SVSRVM  I   EH   ++ +R++L+ 
Sbjct: 322 PIADETRSILDGHIVLSRKLAAANHYPAIDVQASVSRVMNAIVDKEHKAAAQKLRKVLAK 381

Query: 382 CRKNQDLVSIGAYKPGTDKAIDAAFTLKPKLDQYLQQAMKETVPYDMCVNMLRHVL 437
             + + LV IG YK G+DK  D A      ++ +L+Q + E   +D  +  LR V+
Sbjct: 382 YAEVELLVQIGEYKRGSDKEADEALDRVAAVNAFLRQGLDERSGFDDTLAALRKVV 437