Pairwise Alignments

Query, 439 a.a., flagellum-specific ATP synthase FliI from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., V-type ATP synthase subunit B from Methanococcus maripaludis S2

 Score =  161 bits (408), Expect = 3e-44
 Identities = 114/387 (29%), Positives = 184/387 (47%), Gaps = 28/387 (7%)

Query: 33  TLEATGCKAPVGSLCKVETMNGEMEAEVVGFSGDN--------LFLMPSEQIIGVLPGA- 83
           T+E T      G L  ++ + G    E+V  +  N        L       ++ V  G  
Sbjct: 7   TIEYTSVSRIAGPLMVIDGIEGIAYGEIVDITTPNGDKRTGQVLEAREEIAVVQVFEGTS 66

Query: 84  -------KVTPITTESGLPVGMELLGRVIDGVGNPLDGLGPIYTDQRASLNAIPINPLAR 136
                  KV      + + V  ++LGR+ +G G PLDG   I  +++  +N  P+NP++R
Sbjct: 67  ELNTSETKVRFTGDTAKIGVSYDMLGRIFNGAGKPLDGGPEIIAEEKLDINGYPLNPVSR 126

Query: 137 KPINEPLDVGIKAINGLLTVGKGQRIGLFAGSGV-----GKSVTLGMMTRGTTAQVVVV- 190
            P N  +  G+  I+G  T+ +GQ+I +F+GSG+        +      RG   Q  VV 
Sbjct: 127 NPPNAFVQTGVSTIDGTNTLVRGQKIPIFSGSGLPHNKLATQIARQAKVRGEGEQFAVVF 186

Query: 191 GLIGERGREVKEFIEEILGVDGRQRSVVVAAPADSSPLMRLKGCQTALTIAEYFR-DQGL 249
             +G  G E   F++E       +++VV    AD   + R+   + ALT AEY   ++G+
Sbjct: 187 AAMGITGEESNYFMDEFKKTGALEKAVVFINLADDPAIERILTPRIALTTAEYLAYEKGM 246

Query: 250 DVLLLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGGPHQGSITAF 309
            VL+++  LT + +A REIA +  E P  +GYP  ++  L  L ERAG     +G++T  
Sbjct: 247 HVLVILTDLTNYCEALREIAAARNEVPGRRGYPGYMYTDLACLYERAGRVKGKEGTVTQI 306

Query: 310 FTVLTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVSRVMPQ-----IT 364
             +    DD+  PI D +  I +G IVLSRE+   G YP +D+  S+SR+         T
Sbjct: 307 PILTMPDDDITHPIPDLTGYITEGQIVLSRELNRKGVYPPVDILPSLSRLAGNGQGEGKT 366

Query: 365 TDEHLLMSKAVRQILSVCRKNQDLVSI 391
            D+H  +        +  R  +DLV++
Sbjct: 367 RDDHSKVISQAYAAYAEGRGLRDLVAV 393