Pairwise Alignments

Query, 439 a.a., flagellum-specific ATP synthase FliI from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., type III secretion system ATPase from Burkholderia phytofirmans PsJN

 Score =  302 bits (773), Expect = 2e-86
 Identities = 169/421 (40%), Positives = 255/421 (60%), Gaps = 7/421 (1%)

Query: 17  TTRPMASGKLVRVVGLTLEATGCKAPVGSLCKVETMNGEME--AEVVGFSGDNLFLMPSE 74
           ++RP+ S ++V   G+ +   G    +G + ++   +       EVVGFS +   ++P +
Sbjct: 16  SSRPVPSARIVEARGVVVRVVGASLRIGEMVRLMRPDRAEPQIGEVVGFSQEGALVVPLD 75

Query: 75  QIIGVLPGAKVTPITTESGLPVGMELLGRVIDGVGNPLDG-LGPIYTDQRASLNAIP-IN 132
            + G+    +V       G    +++LGRV+DG+G PLDG + P     + S+N +  IN
Sbjct: 76  GLAGLSDITQVEGCGLSWGRLDALDMLGRVVDGLGRPLDGRVAPKAVSAQHSMNILSHIN 135

Query: 133 PLARKPINEPLDVGIKAINGLLTVGKGQRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGL 192
           PL R  I+ P   G++ I+GLL+ G GQR+G+FA +G GKS  +GM+  G +   +VV L
Sbjct: 136 PLDRPVISTPFPTGVRVIDGLLSCGVGQRVGIFAAAGGGKSTLMGMIANGASVDAIVVAL 195

Query: 193 IGERGREVKEFIEEILGVDGRQRSVVVAAPADSSPLMRLKGCQTALTIAEYFRDQGLDVL 252
           IGERGREV EFI + LG   R  S+V+A+ ++     R+K  + A  +A   R +G  VL
Sbjct: 196 IGERGREVGEFIHDHLGAR-RASSIVIASTSERPAAERIKAAELACRVASDLRAEGKHVL 254

Query: 253 LLMDSLTRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGGPHQGSITAFFTV 312
           LL DSLTR+A+A RE+ L+VGEPP  +GYPP VFA+LP L+E AG     QG++TAFFTV
Sbjct: 255 LLFDSLTRYARALREVGLAVGEPPVRRGYPPRVFAELPRLIETAGL--TRQGAVTAFFTV 312

Query: 313 LTEGDDLQDPIADASRAILDGHIVLSREMADAGHYPAIDVEKSVSRVMPQITTDEHLLMS 372
           L E +++ DP+A+ +R++LDGHI LS  +  AGHYPAIDV KS SRVM ++T+  H   +
Sbjct: 313 LAEDEEMSDPVAEEARSLLDGHIQLSGRLGGAGHYPAIDVLKSKSRVMTRVTSRAHRDDA 372

Query: 373 KAVRQILSVCRKNQDLVSIGAYKPGTDKAIDAAFTLKPKLDQYLQQAMKETVPYDMCVNM 432
             VR  +S  ++ + L+ IG Y+ G D A D A      ++++L+Q   E   ++  +  
Sbjct: 373 GRVRGWMSRYQEVELLLQIGEYRRGNDSASDLAIDRHEMIERFLRQRHDEYSDWEATIGS 432

Query: 433 L 433
           L
Sbjct: 433 L 433