Pairwise Alignments

Query, 674 a.a., flagellar hook-length control protein FliK from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., Flagellar hook-length control protein FliK from Pseudomonas fluorescens FW300-N2E2

 Score = 94.0 bits (232), Expect = 1e-23
 Identities = 129/471 (27%), Positives = 192/471 (40%), Gaps = 95/471 (20%)

Query: 210 QALDSQHPDRIRNATPPEAVLPIESA-------TAISNRALSTSADLDAAVSDSAA---T 259
           Q    Q PD+   A  P    P++SA       T   +    T A  +  V+DS      
Sbjct: 39  QVFAKQAPDKAAAAPEP----PVKSARDNASSNTVKKDTGNQTPATSEPTVADSGKPLPA 94

Query: 260 EDEIAQDEWMASALMGGALVGGLSGASLAAANTVHAEPVEGAMLEGM------PLTQTFA 313
           +  ++ D+  AS             A  A      A PV+ ++  G+      P+     
Sbjct: 95  DKSVSADDKTASD----------DKADSAETPVAEASPVDPSLDPGLLPDVTVPVATIAP 144

Query: 314 NTAALASPSAEVSEALAASSQALKATPLTQSALNPASIMADEGLNQSTSATETGKVVIPW 373
             A +A+   +V+ A+AA   A    P+ Q+A+ P +  A +                  
Sbjct: 145 EPAPVATTETQVTTAVAAPL-APPVAPV-QAAVVPEADPAFD------------------ 184

Query: 374 GTQMPTDNELAALTPELKAMLEEGGKAKAPVPNALAQSVAQGLTPAHLAAQQTGTTALPM 433
               P  + L AL P L+  +E+GG   A      +Q+ ++   PA L  +         
Sbjct: 185 ----PEADPLDAL-PALRLAMEQGGHVSAS-----SQAQSKTAAPASLDGE--------- 225

Query: 434 NPTAATPIDIAALAPQTVAVN--PMLNPAATVNPELAASSAMLAALGGRALAG-SDERRA 490
            PT+A          QT A     ML   A  N   + S     A GG    G  D   A
Sbjct: 226 -PTSA----------QTFAAGMASMLTVQADQNSTESGSQGGDKAFGGLISEGLKDLSAA 274

Query: 491 VSESGQEDLAQQIAAAAGQGTAQNQALNRAESQLVQTNATPVPLNKEMAADQLAERVQMM 550
            S++  +D A ++AA         QA     +  V  N  P+ +N+    +++  RV  +
Sbjct: 275 SSDTRVDDFANRLAALT-------QAATPKTANAVPVNQ-PIAMNQSGWTEEVVNRVMYL 326

Query: 551 MSKNLKNIDIRLDPPELGRMHIRMNMQGDGAT-VHFTVANQHAREALEQTMPRLREMLAQ 609
            S NLK  DI+L P ELGR+ IR+NM  D  T V F  A+   REALE  M RLR+  AQ
Sbjct: 327 SSVNLKAADIQLQPAELGRLDIRVNMVPDQQTQVTFMSAHSGVREALEGQMHRLRDSFAQ 386

Query: 610 QGVQLGDTSVQQQSAGQQ---QRYTGQEQSGFGQSARNERLNSEENLDTDI 657
           QG+   D SV  QS G Q   Q+   Q Q+G   S+     +++E+L   +
Sbjct: 387 QGMGQVDVSVSDQSRGSQNQGQQAQQQAQAGRTTSSGGRVDSADEHLPASV 437