Pairwise Alignments

Query, 674 a.a., flagellar hook-length control protein FliK from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., flagellar hook-length control protein from Pseudomonas fluorescens FW300-N2C3

 Score =  101 bits (251), Expect = 9e-26
 Identities = 124/449 (27%), Positives = 187/449 (41%), Gaps = 86/449 (19%)

Query: 211 ALDSQHPDRIRNATPPEAVLPIESATAISNRALSTSADLDAAVSDSAATEDEIAQDEWMA 270
           A D    + ++  T  E+    E   A+S + L   AD  A+  D AA++          
Sbjct: 60  ARDKAADNTVKKDTGNESPAAPEPTVAVSGKPLP--ADKPASTDDKAASD---------- 107

Query: 271 SALMGGALVGGLSGASLAAANTVHAEPVEGAMLEGM--PLTQTFANTAALASPSAEVSEA 328
                       + A  A      A PV+ ++  G+   +T   A   A  +P A  +EA
Sbjct: 108 ------------TSADSAETPVADAAPVDPSLDPGVLPDMTVPVATAPAEPAPVAVTAEA 155

Query: 329 LAASSQALKATPLTQSALNPASIMADEGLNQSTSATETGKVVIPWGTQMPTDNELAALTP 388
             A++ A    PL  +A  PA+ + D   +                   P  + L AL P
Sbjct: 156 PVATAVAAPVVPLAAAA-QPAAPVVDPAFD-------------------PEADPLDAL-P 194

Query: 389 ELKAMLEEGGKAKAPVPNALAQSVAQGLTPAHLAAQQTGTTALPMNPTAATPIDIAALAP 448
            L+  +E+GG       +A +Q+  +   P  L  +          PT+A          
Sbjct: 195 ALRLAMEQGGHV-----SATSQAQPKSAAPVSLDGE----------PTSA---------- 229

Query: 449 QTVAVN--PMLNPAATVNPELAASSAMLAALGGRALAG-SDERRAVSESGQEDLAQQIAA 505
           QT A     ML+  A  N   + S     A GG    G  D   A S++  +D A ++AA
Sbjct: 230 QTFAAGMASMLSVQADQNSTESGSQGGDKAFGGLISEGLKDLGAASSDTRVDDFANRLAA 289

Query: 506 AAGQGTAQNQALNRAESQLVQTNATPVPLNKEMAADQLAERVQMMMSKNLKNIDIRLDPP 565
                    QA     +  V  N  P+ +N+    +++  RV  + S NLK  DI+L P 
Sbjct: 290 LT-------QAATPKTANAVPVNQ-PIAMNQSGWTEEVVNRVMYLSSVNLKAADIQLQPA 341

Query: 566 ELGRMHIRMNMQGDGAT-VHFTVANQHAREALEQTMPRLREMLAQQGVQLGDTSVQQQSA 624
           ELGR+ IR+NM  D  T V F  A+   REALE  + RLR+  +QQG+   D SV  QS 
Sbjct: 342 ELGRLDIRVNMVPDQQTQVTFMSAHSGVREALEGQLHRLRDSFSQQGMGQVDVSVSDQSR 401

Query: 625 G-QQQRYTGQEQSGFGQSARN-ERLNSEE 651
           G Q Q    Q+Q+  G++  +  R++S E
Sbjct: 402 GSQNQEQQAQQQARAGRTTTSGGRVDSAE 430