Pairwise Alignments

Query, 674 a.a., flagellar hook-length control protein FliK from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., flagellar hook-length control protein FliK from Pseudomonas aeruginosa PA14

 Score =  101 bits (252), Expect = 6e-26
 Identities = 89/307 (28%), Positives = 139/307 (45%), Gaps = 30/307 (9%)

Query: 393 MLEEGGKAKAPVPNALAQSVAQGLTPAHLAAQQTGTTALPMNPTAATPIDIAALAPQTVA 452
           ML+E  +A    P     S A    PA L    +  T + +N   A  + +   A Q  A
Sbjct: 126 MLDENTQATLLPPAVPTASSA----PASLTEASSDPTLVKLNGVPAVNMALEQGA-QDAA 180

Query: 453 VNPMLNPAATVNPELAASSAMLAALGGRALAGSDERRAVSESGQEDLAQQIAAAAGQGTA 512
                 PA + +P  A     LA+L   +L  + + +A+    Q+     IA+AA +   
Sbjct: 181 QAAKGGPAKSADPRQANLGDALASLTSDSLPKAVDGKALEAQLQQTAEPAIASAASESLL 240

Query: 513 QNQA-------------LNRAESQLVQTN--------ATPVPLNKEMAADQLAERVQMMM 551
           +++A             L +A +Q   TN          PV + +   ++ + +RV  M 
Sbjct: 241 ESKAEPRGEPFAAKLNGLTQAMAQQALTNRPVNGTVPGQPVAIQQNGWSEAVVDRVMWMS 300

Query: 552 SKNLKNIDIRLDPPELGRMHIRMNMQGDGATVHFTVANQHAREALEQTMPRLREMLAQQG 611
           S+NLK+ +I+LDP ELGR+ +R++M  D   V F   N   R+ALE  M RLR+M +QQG
Sbjct: 301 SQNLKSAEIQLDPAELGRLDVRIHMTADQTQVTFASPNAGVRDALESQMHRLRDMFSQQG 360

Query: 612 VQLGDTSVQQQS--AGQQQRYTGQEQSGFGQSARNERLNSEENLD--TDIKLDLNVATKR 667
           +   D +V  QS   G Q +  G+  S  G+    E    EE L   ++I+     +  R
Sbjct: 361 MNQLDVNVSDQSLARGWQGQQQGEGGSARGRGFAGEASGDEETLAGVSEIRSRPGASAAR 420

Query: 668 DGISYYA 674
             + YYA
Sbjct: 421 GLVDYYA 427