Pairwise Alignments

Query, 674 a.a., flagellar hook-length control protein FliK from Vibrio cholerae E7946 ATCC 55056

Subject, 431 a.a., flagellar hook-length control protein from Herbaspirillum seropedicae SmR1

 Score = 80.1 bits (196), Expect = 2e-19
 Identities = 107/408 (26%), Positives = 165/408 (40%), Gaps = 60/408 (14%)

Query: 286 SLAAANTVHAEPVEGAMLEGMPLTQTF---ANTAALASPSAEVSEALAASSQALKATPLT 342
           S AA     A P +    + +P  Q      +T    +PS +  +A      A  + P T
Sbjct: 14  SQAATGARSANPADSFSAD-VPFNQVLNSQVSTRNQQNPSQDKPQAAQEQQPAAPSQP-T 71

Query: 343 QSALNPASIMADEGLNQSTSATETGKVVIPWGTQMPTDNELAALTPELKAMLEE---GGK 399
           QSA +  +  A+    +  SA +  K      TQ     EL AL   +     +    GK
Sbjct: 72  QSASSAKASAANGSEQKQDSAKDEDKDSDDTATQASA--ELLALVANIAQNAVKPVTDGK 129

Query: 400 AKAPVPNALAQSVAQGLTPAHLAAQQTGTTALPMNPTAATPIDIAALAPQTVAVNPMLNP 459
           ++    + LAQ+   G + +    QQ    AL  +      ID+A L     A     + 
Sbjct: 130 SEHTDADLLAQAKRGGASLSLADEQQ----ALAGDGKDGK-IDLAGLQSSLAANKGKQDG 184

Query: 460 AATVNPELAASSAMLAALGGRALAGSDERRAV---SESGQ---EDLAQQIAAAAGQGTAQ 513
           AA    +LA  +    A    A A   E+ AV   SE  Q   ++ A  +A  A  G A 
Sbjct: 185 AAA---DLARKANAAEANPTDAHAAKGEKPAVDLGSEKAQALSKEDASTLANRAQYGKAT 241

Query: 514 NQALNRAESQLVQTNATPV---PLNKEMAADQ-------------------------LAE 545
            + +  A+ +L Q   TPV    + + +AA+Q                         +  
Sbjct: 242 TETVATAKQELPQATPTPVVMPAMQQALAANQTQAVFGTTYTDKIQPNVGSAGWDQAVGN 301

Query: 546 RVQMMMSKNLKNIDIRLDPPELGRMHIRMNMQGDGATVHFTVANQHAREALEQTMPRLRE 605
           ++  M +  +++  + L+PP+LG M + +N+    A   F  A    ++ALE  MP+LRE
Sbjct: 302 KITWMATGGIQSASLTLNPPDLGPMQVVLNVHNQQADATFITAQPEVKQALEAAMPKLRE 361

Query: 606 MLAQQGVQLGDTSV------QQQSA--GQQQRYTGQEQSGFGQSARNE 645
           M+ Q G+QLG  +V      QQQ A  GQQQ  +     G GQ    E
Sbjct: 362 MMDQAGIQLGQATVNTGMPNQQQGANGGQQQARSSSGAGGAGQEQDGE 409