Pairwise Alignments

Query, 349 a.a., flagellar motor switch protein FliM from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., Flagellar motor switch protein FliM from Acidovorax sp. GW101-3H11

 Score =  263 bits (671), Expect = 6e-75
 Identities = 123/320 (38%), Positives = 196/320 (61%)

Query: 5   LSQDEIDALLHGVDSVDEEEEELPKSGPSATNFDFSSQDRIVRGRMPTLELINERFARHL 64
           LSQ+E+DALL GV    ++  E      S  N+D SSQ+RIVRGRMPT+E++NERFAR+ 
Sbjct: 6   LSQEEVDALLEGVTGESQKSVEEVAEAGSVRNYDISSQERIVRGRMPTMEIVNERFARNF 65

Query: 65  RISLFNMLRKTAEVSINGVQMMKFGEYQNTLYVPTSLNMVRFRPLKGTALVTMEARLVFI 124
           RI LFN +R++ E+S+  V + ++  +   L VPT+ N+V  RPL+G+ L+  E  LVF 
Sbjct: 66  RIGLFNFIRRSPEISVGTVSVQRYSAFLRELAVPTNFNIVAIRPLRGSGLIVCEPSLVFG 125

Query: 125 LVENFFGGDGRYHARIEGREFTPTERRVIQLLLKIVFADYKEAWSPVMGVEFEYLDSEVN 184
           +++  +GG G++  RIEGR+F+PTE+RVI  L+ ++  +YK+AW  +  +E EY  SE+ 
Sbjct: 126 IIDTLYGGVGKFQTRIEGRDFSPTEQRVINRLVDVICTEYKKAWQGIYPLELEYQRSEMQ 185

Query: 185 PSMANIVSPTEVIVVSSFHVEVDGGGGDFHMVMPYSMVEPIRELLDAGVQSDKMETDVRW 244
           P  ANI +P+E++V ++F +E+    G  H+ MPY+ +EPIR++L +  Q D +E D RW
Sbjct: 186 PQFANIATPSEIVVSTAFQLEIGDLSGAIHVCMPYATLEPIRDVLYSSTQGDSIEVDRRW 245

Query: 245 STALREEIMDVPVNFRVNLLEMDIALRDLMELQVGDVIPIKMPEHAVMFVEELPTYRVKM 304
              L+ EI    V     L + D  +  L+ ++ GD I +         +  +P +  + 
Sbjct: 246 VNVLKREIQSAEVTLVAELAKADATVEQLLAMKPGDFIELDREPRIRASIGGVPIFECQY 305

Query: 305 GRSGEKLAVQVSEKIKRPDV 324
           G    K A+++ E ++  D+
Sbjct: 306 GTHNSKYAIRIEECLRNSDM 325