Pairwise Alignments

Query, 349 a.a., flagellar motor switch protein FliM from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., flagellar motor switch protein FliM from Pantoea sp. MT58

 Score =  237 bits (604), Expect = 4e-67
 Identities = 121/319 (37%), Positives = 198/319 (62%), Gaps = 5/319 (1%)

Query: 4   LLSQDEIDALLHGVDSVDEEEEELPKSGPSAT--NFDFSSQDRIVRGRMPTLELINERFA 61
           +LSQ EIDALL+G     EEE++  ++GP      +D ++Q R+VR R+  LE+INERFA
Sbjct: 5   ILSQAEIDALLNGDSGSAEEEKK--QNGPEGDIRPYDPNTQRRVVRERLQALEIINERFA 62

Query: 62  RHLRISLFNMLRKTAEVSINGVQMMKFGEYQNTLYVPTSLNMVRFRPLKGTALVTMEARL 121
           R  R++LFN+LR++ ++S+  +++  + E+   L VPT+LN++  +PL+GTALV     L
Sbjct: 63  RSFRMALFNLLRRSPDISVGAIKIQPYHEFARNLPVPTNLNLIHLKPLRGTALVVFSPSL 122

Query: 122 VFILVENFFGGDGRYHARIEGREFTPTERRVIQLLLKIVFADYKEAWSPVMGVEFEYLDS 181
           VFI V+N FGGDGR+  ++EGREFT TE+RVI+ +LK+    Y +AW  +  ++ EY+ S
Sbjct: 123 VFIAVDNLFGGDGRFPTKVEGREFTHTEQRVIRRMLKLALDGYSDAWKAIYPLDVEYVRS 182

Query: 182 EVNPSMANI-VSPTEVIVVSSFHVEVDGGGGDFHMVMPYSMVEPIRELLDAGVQSDKMET 240
           E+     NI  SP +++V + F VE+    G+F++ +P+SM+EP+RELL      +  + 
Sbjct: 183 EMQVKFTNITTSPNDIVVNTPFQVEIGNLVGEFNICIPFSMIEPLRELLVNPPLENSRQE 242

Query: 241 DVRWSTALREEIMDVPVNFRVNLLEMDIALRDLMELQVGDVIPIKMPEHAVMFVEELPTY 300
           D  W   L +++    +    +  E  + L  +++L+ GDV+PI+ PE  +  V+ +P  
Sbjct: 243 DNHWRDNLVKQVQHSELELIAHFAETSLRLSRILQLKPGDVLPIEKPERIIAHVDSVPVL 302

Query: 301 RVKMGRSGEKLAVQVSEKI 319
             + G    + A++V   I
Sbjct: 303 TSQYGTMNGQYALRVEHLI 321