Pairwise Alignments

Query, 349 a.a., flagellar motor switch protein FliM from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., flagellar motor switch protein FliM (RefSeq) from Shewanella sp. ANA-3

 Score =  506 bits (1304), Expect = e-148
 Identities = 240/329 (72%), Positives = 295/329 (89%), Gaps = 1/329 (0%)

Query: 1   MTDLLSQDEIDALLHGVDSVDEEEEELPKSGPSATNFDFSSQDRIVRGRMPTLELINERF 60
           M+DLLSQDEIDALLHGVD V EE+ EL  +G  A ++DFSSQDRIVRGRMPTLE++NERF
Sbjct: 1   MSDLLSQDEIDALLHGVDDV-EEDNELDAAGLEARSYDFSSQDRIVRGRMPTLEIVNERF 59

Query: 61  ARHLRISLFNMLRKTAEVSINGVQMMKFGEYQNTLYVPTSLNMVRFRPLKGTALVTMEAR 120
           ARHLRIS+FNM+R+ AEVSINGVQM+KFGEY +TL+VPTSLNMVRF PLKGTAL+TMEAR
Sbjct: 60  ARHLRISMFNMMRRAAEVSINGVQMLKFGEYVHTLFVPTSLNMVRFHPLKGTALITMEAR 119

Query: 121 LVFILVENFFGGDGRYHARIEGREFTPTERRVIQLLLKIVFADYKEAWSPVMGVEFEYLD 180
           LVFILV+NFFGGDGR+HA+IEGREFTPTERR++QLLLKI+F DYK+AW+PVM VEF+YLD
Sbjct: 120 LVFILVDNFFGGDGRFHAKIEGREFTPTERRIVQLLLKIIFEDYKDAWAPVMDVEFDYLD 179

Query: 181 SEVNPSMANIVSPTEVIVVSSFHVEVDGGGGDFHMVMPYSMVEPIRELLDAGVQSDKMET 240
           SEVNP+MANIVSPTEV+V++SFH+EVDGGGGDFH+ MPYSM+EPIRELLDAGVQSDK +T
Sbjct: 180 SEVNPAMANIVSPTEVVVINSFHIEVDGGGGDFHITMPYSMIEPIRELLDAGVQSDKQDT 239

Query: 241 DVRWSTALREEIMDVPVNFRVNLLEMDIALRDLMELQVGDVIPIKMPEHAVMFVEELPTY 300
           D+RWS AL +EIMDV V F  +++E ++ L+D+M  + GD+IPI++PE+ +M +E+LPTY
Sbjct: 240 DMRWSQALHDEIMDVKVGFDASVVEHELTLKDVMNFKAGDIIPIELPEYIMMKIEDLPTY 299

Query: 301 RVKMGRSGEKLAVQVSEKIKRPDVVKTDL 329
           R KMGRS + LA+++ EKI RP+ VK++L
Sbjct: 300 RCKMGRSRDNLALKIYEKIPRPETVKSEL 328