Pairwise Alignments

Query, 136 a.a., flagellar motor switch protein FliN from Vibrio cholerae E7946 ATCC 55056

Subject, 123 a.a., flagellar motor switch protein FliN from Pseudomonas stutzeri RCH2

 Score = 78.2 bits (191), Expect = 4e-20
 Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 5/104 (4%)

Query: 22  NAPDIDVDEILAAPLEELKNTAPPITDDERRKLDTIMDIPVTISMEVGRSKISIRNLLQL 81
           N  D+ +D + A  LE     AP      R+ L     IPV +++EV  ++IS++ L++ 
Sbjct: 15  NEGDLSLDAVDAPALE-----APAAAPAPRQDLSFFGKIPVNVTLEVASAEISLKELMEC 69

Query: 82  NQGSVVELDRIAGESLDVMVNGTLIAHGEVVVVNDKFGIRLTDV 125
           +  SV+ LD++AGE LDV VNGTL A  EVVV+N  +G+R+ ++
Sbjct: 70  DTSSVIVLDKLAGEPLDVKVNGTLFAKAEVVVMNGNYGLRIVEL 113