Pairwise Alignments

Query, 136 a.a., flagellar motor switch protein FliN from Vibrio cholerae E7946 ATCC 55056

Subject, 157 a.a., flagellar motor switch protein FliN from Pseudomonas stutzeri RCH2

 Score =  164 bits (415), Expect = 5e-46
 Identities = 95/148 (64%), Positives = 111/148 (75%), Gaps = 17/148 (11%)

Query: 5   EDERLAEEWAAALGEDPNAPDIDVDEIL------------AAPLEEL----KNTAPPITD 48
           E++ LA+EWAAAL E  +A   D+D +L             APLE+     K+TA P+  
Sbjct: 11  EEQALADEWAAALAEAGDASQDDIDALLNQAPAAAAPAAPRAPLEDFASAPKSTAVPL-G 69

Query: 49  DERRKLDTIMDIPVTISMEVGRSKISIRNLLQLNQGSVVELDRIAGESLDVMVNGTLIAH 108
            E   LD I+DIPV+ISMEVG ++ISIRNLLQLNQGSVVELDR+AGE LDV+VNGTLIAH
Sbjct: 70  LEGPNLDVILDIPVSISMEVGSTEISIRNLLQLNQGSVVELDRLAGEPLDVLVNGTLIAH 129

Query: 109 GEVVVVNDKFGIRLTDVISQTERIKKLR 136
           GEVVVVN+KFGIRLTDVIS TERIKKLR
Sbjct: 130 GEVVVVNEKFGIRLTDVISPTERIKKLR 157