Pairwise Alignments

Query, 136 a.a., flagellar motor switch protein FliN from Vibrio cholerae E7946 ATCC 55056

Subject, 127 a.a., flagellar motor switch protein (RefSeq) from Shewanella loihica PV-4

 Score =  176 bits (447), Expect = 8e-50
 Identities = 93/130 (71%), Positives = 108/130 (83%), Gaps = 6/130 (4%)

Query: 7   ERLAEEWAAALGEDPNAPDIDVDEILAAPLEELKNTAPPITDDERRKLDTIMDIPVTISM 66
           E   ++WAAA+ E        ++E  A  L+EL +++ P+T++E  KLDTIMDIPVTISM
Sbjct: 4   EDTGDDWAAAMAEQA------LEEAQAVELDELADSSKPLTEEEAAKLDTIMDIPVTISM 57

Query: 67  EVGRSKISIRNLLQLNQGSVVELDRIAGESLDVMVNGTLIAHGEVVVVNDKFGIRLTDVI 126
           EVGRS I+IRNLLQLNQGSVVELDR+AGE LDVMVNGTLIAHGEVVVVNDKFGIRLTDVI
Sbjct: 58  EVGRSFINIRNLLQLNQGSVVELDRVAGEPLDVMVNGTLIAHGEVVVVNDKFGIRLTDVI 117

Query: 127 SQTERIKKLR 136
           SQTERIKKL+
Sbjct: 118 SQTERIKKLK 127