Pairwise Alignments

Query, 299 a.a., flagellar biosynthetic protein FliP from Vibrio cholerae E7946 ATCC 55056

Subject, 250 a.a., Flagellar transport protein FliP from Pseudomonas syringae pv. syringae B728a

 Score =  294 bits (753), Expect = 1e-84
 Identities = 143/221 (64%), Positives = 184/221 (83%), Gaps = 1/221 (0%)

Query: 78  IPAFTMTTNSDGSEDYSINLQILALMTMLGFLPAMVILMTSFTRIVVVMSILRQAMGLQQ 137
           IPA T++  +DG ++YS++LQIL +MT L F+PA V+LMTSFTRI++V SILRQA+GLQQ
Sbjct: 27  IPAITLSNGADGQQEYSVSLQILLIMTALSFIPAFVMLMTSFTRIIIVFSILRQALGLQQ 86

Query: 138 TPSNQVIIGIALFLTFFIMAPVFNQINEQAVQPYLNEQITARQAFDLAQEPLKAFMLKQT 197
            PSNQ++ G+ALFLT FIMAPVF+++N+ A+QPYL E+++A+ A   AQ P+K FML QT
Sbjct: 87  APSNQILTGMALFLTMFIMAPVFDRVNQDALQPYLAEKLSAQDAVAKAQVPIKDFMLAQT 146

Query: 198 RVNDLETFVEMS-GAQVTAPEQVSMAVLIPAFITSELKTAFQIGFMLFLPFLIIDLVVAS 256
           R +DLE F+ +S    +  P+   + +L+PAF+ SELKTAFQIGFM+F+PFLIIDLVVAS
Sbjct: 147 RTSDLELFMRLSKRTDIPTPDAAPLTILVPAFVISELKTAFQIGFMIFIPFLIIDLVVAS 206

Query: 257 VLMAMGMMMLSPMIVSLPFKLMLFVLVDGWNLILSTLAGSF 297
           VLMAMGMMMLSP+I+SLPFK+MLFVLVDGW LI+ TLAGSF
Sbjct: 207 VLMAMGMMMLSPLIISLPFKIMLFVLVDGWALIVGTLAGSF 247